CATH Domain: 1yirA00 XML data for domain: 1yirA00

Molscript image for 1yirA00
1yirA00
PDB coordinates for domain 1yirA00

PDB 1yir, Chain A, Domain 0

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.20 Alpha-Beta Barrel
3.20.140 nicotinate phosphoribosyltransferase
3.20.140.10 nicotinate phosphoribosyltransferase Gene3D
3.20.140.10.2
3.20.140.10.2.1
3.20.140.10.2.1.1
3.20.140.10.2.1.1.1
3.20.140.10.2.1.1.1.1

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Segment boundaries for domain 1yirA00

Chopping figure for domain 1yirA00
DomainStart PDB ResidueStop PDB Residue
1yirA00 3 399

Structural Neighbourhood (1 entries)

There are 1 matching structural neighberhood comparisons for CATH ID 3.20.140.10.2.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 1 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1ybeB01 87.83 Agrobacterium tumefaciens str. C58Nicotinate phosphoribosyltransferase [EC:2.4.2.11]Nicotinate phosphoribosyltransferaseNicotinate and nicotinamide metabolismMetabolic pathways 3.20.140.10 399 34 93 2.41 2.58
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Displaying entries 1 to 1 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1yirA00
LAESAFSERIVQNLLDTDFYKLTMMQAVLHNYPNAEVEWEFRCRNQEDLRLYLPAIREQLEYLAGLAISDEQLAFLERIP
FLAPDFIRFLGLFRFNPRYVQTGIENDEFFLRLKGPWLHVILFEVPLLAMISEVRNRARYPAATVEQARERLQEKFDWLR
REASAEELAGFKMADFGTRRRFSYRVHEAVVSGLKEDFPGCFVGTSNVHLARKLDLKPLGTMAHEWLMAHQQLGPRLIDS
QSAALDCWVREYRGLLGIALTDCITTDAFLRDFDLYFAKLFDGLRHDSGDPLLWAEKTIAHYLKLGIDPLTKTLVFSDGL
DLPRALKIYRALQGRINVSFGIGTHFTCDLPGVEPMNIVVKMSACNGHPVAKISDTPPDFIHYLKHVFQV
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1yirA00
MSLAESAFSERIVQNLLDTDFYKLTMMQAVLHNYPNAEVEWEFRCRNQEDLRLYLPAIREQLEYLAGLAISDEQLAFLER
IPFLAPDFIRFLGLFRFNPRYVQTGIENDEFFLRLKGPWLHVILFEVPLLAMISEVRNRARYPAATVEQARERLQEKFDW
LRREASAEELAGFKMADFGTRRRFSYRVHEAVVSGLKEDFPGCFVGTSNVHLARKLDLKPLGTMAHEWLMAHQQLGPRLI
DSQSAALDCWVREYRGLLGIALTDCITTDAFLRDFDLYFAKLFDGLRHDSGDPLLWAEKTIAHYLKLGIDPLTKTLVFSD
GLDLPRALKIYRALQGRINVSFGIGTHFTCDLPGVEPMNIVVKMSACNGHPVAKISDTPGKAQCRDPDFIHYLKHVFQVA
EGHHHHHH
BLAST against CATH

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Domain History Events (3)

Insertion by sillitoe on 06 Mar 2006 15:53

HomCheck 'New T' domains

Flow stage update by sillitoe on 06 Mar 2006 15:53

HomCheck 'New T' domains

Insertion by auto on 06 Mar 2006 00:28

Cut based on decision in database "DomChop" on "cathdb"