CATH Domain: 1ygyB03 XML data for domain: 1ygyB03

Molscript image for 1ygyB03
1ygyB03
PDB coordinates for domain 1ygyB03

PDB 1ygy, Chain B, Domain 3

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.30 2-Layer Sandwich
3.30.1330 60s Ribosomal Protein L30; Chain: A;
3.30.1330.90 D-3-phosphoglycerate dehydrogenase; domain 3 Gene3D
3.30.1330.90.2
3.30.1330.90.2.1
3.30.1330.90.2.1.1
3.30.1330.90.2.1.1.1
3.30.1330.90.2.1.1.1.1

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Segment boundaries for domain 1ygyB03

Chopping figure for domain 1ygyB03
DomainStart PDB ResidueStop PDB Residue
1ygyB01 3 99
1ygyB01 281 315
1ygyB02 100 280
1ygyB03 316 454
1ygyB04 455 529

Structural Neighbourhood (0 entries)

Sorry, we could not find any non-redundant representatives with similar structural scores to this domain in CATH.


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Domain ATOM Sequence 

>pdb|1ygyB03
GGGVVNEEVAPWLDLVRKLGVLAGVLSDELPVSLSVQVRGELAAEEVEVLRLSALRGLFSAVIEDAVTFVNAPALAAERG
VTAEICKASESPNHRSVVDVRAVGADGSVVTVSGTLYGPQLSQKIVQINGRHFDLRAQG
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1ygyB03
GGGVVNEEVAPWLDLVRKLGVLAGVLSDELPVSLSVQVRGELAAEEVEVLRLSALRGLFSAVIEDAVTFVNAPALAAERG
VTAEICKASESPNHRSVVDVRAVGADGSVVTVSGTLYGPQLSQKIVQINGRHFDLRAQG
BLAST against CATH

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Domain History Events (5)

Domain assigned by auto on 28 Apr 2006 20:45

Assigning to "3.30.1330.90" based on similarity with "1ygyA03" (NWSI: 100, NWO: 95.6834532374101, SPS: 93.39, SPO: 94, RMSD: 1.59)

Flow stage update by auto on 28 Apr 2006 17:51

NW result present for Domain "1ygyB03"

Flow stage update by auto on 28 Apr 2006 17:47

All required files are present for Domain "1ygyB03"

Flow stage update by auto on 27 Apr 2006 17:32

Beginning processing for Domain "1ygyB03"

Insertion by auto on 06 Mar 2006 00:27

Cut based on decision in database "DomChop" on "cathdb"