CATH Domain: 1ybeB01 XML data for domain: 1ybeB01

Molscript image for 1ybeB01
1ybeB01
PDB coordinates for domain 1ybeB01

PDB 1ybe, Chain B, Domain 1

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.20 Alpha-Beta Barrel
3.20.140 nicotinate phosphoribosyltransferase
3.20.140.10 nicotinate phosphoribosyltransferase Gene3D
3.20.140.10.3
3.20.140.10.3.1
3.20.140.10.3.1.1
3.20.140.10.3.1.1.1
3.20.140.10.3.1.1.1.1

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Segment boundaries for domain 1ybeB01

Chopping figure for domain 1ybeB01
DomainStart PDB ResidueStop PDB Residue
1ybeB01 8 416

Structural Neighbourhood (0 entries)

Sorry, we could not find any non-redundant representatives with similar structural scores to this domain in CATH.


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Domain ATOM Sequence 

>pdb|1ybeB01
MTKTDIATRWKLDPIVRSLIDTDFYKLLMLQMIWKLYPEVDATFSLINRTKTVRLAEEIDEMELREQLDHARTLRLSKKE
NIWLAGNTFYGRSQIFEPEFLSWLSSYQLPEYELFKRDGQYELNFHGRWMDTTLWEIPALSIINELRSRSAMRSLGYFTL
DVLYARAKAKMWEKVERLRELPGLRISDFGTRRRHSFLWQRWCVEALKEGIGPAFTGTSNVLLAMDSDLEAVGTNAHELP
MVVAALAQTNEELAAAPYQVLKDWNRLYGGNLLIVLPDAFGTAAFLRNAPEWVADWTGFRPDSAPPIEGGEKIIEWWRKM
GRDPRTKMLIFSDGLDVDAIVDTYRHFEGRVRMSFGWGTNLTNDFAGCAPLKPISIVCKVSDANGRPAVKLSDNPQKAT
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1ybeB01
MSLGNASMTKTDIATRVHNHTWKLDPIVRSLIDTDFYKLLMLQMIWKLYPEVDATFSLINRTKTVRLAEEIDEMELREQL
DHARTLRLSKKENIWLAGNTFYGRSQIFEPEFLSWLSSYQLPEYELFKRDGQYELNFHGRWMDTTLWEIPALSIINELRS
RSAMRSLGYFTLDVLYARAKAKMWEKVERLRELPGLRISDFGTRRRHSFLWQRWCVEALKEGIGPAFTGTSNVLLAMDSD
LEAVGTNAHELPMVVAALAQTNEELAAAPYQVLKDWNRLYGGNLLIVLPDAFGTAAFLRNAPEWVADWTGFRPDSAPPIE
GGEKIIEWWRKMGRDPRTKMLIFSDGLDVDAIVDTYRHFEGRVRMSFGWGTNLTNDFAGCAPKTIASLKPISIVCKVSDA
NGRPAVKLSDNPQKAT
BLAST against CATH

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Domain History Events (5)

Domain assigned by auto on 28 Apr 2006 20:40

Assigning to "3.20.140.10" based on similarity with "1ybeA00" (NWSI: 100, NWO: 96.0739030023095, SPS: 94.60, SPO: 95, RMSD: 0.54)

Flow stage update by auto on 28 Apr 2006 17:51

NW result present for Domain "1ybeB01"

Flow stage update by auto on 28 Apr 2006 17:47

All required files are present for Domain "1ybeB01"

Flow stage update by auto on 27 Apr 2006 17:32

Beginning processing for Domain "1ybeB01"

Insertion by auto on 06 Mar 2006 00:26

Cut based on decision in database "DomChop" on "cathdb"