CATH Domain: 1yb5A01 XML data for domain: 1yb5A01

Molscript image for 1yb5A01
1yb5A01
PDB coordinates for domain 1yb5A01

PDB 1yb5, Chain A, Domain 1

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.90 Alpha-Beta Complex
3.90.180 Quinone Oxidoreductase; Chain A, domain 1
3.90.180.10 Medium-chain alcohol dehydrogenases, catalytic domain Gene3D
3.90.180.10.12
3.90.180.10.12.1
3.90.180.10.12.1.1
3.90.180.10.12.1.1.1
3.90.180.10.12.1.1.1.1

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Segment boundaries for domain 1yb5A01

Chopping figure for domain 1yb5A01
DomainStart PDB ResidueStop PDB Residue
1yb5A01 6 128
1yb5A01 297 329
1yb5A02 129 296

Structural Neighbourhood (5 entries)

There are 5 matching structural neighberhood comparisons for CATH ID 3.90.180.10.12.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 5 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1iz0A01 88.08 NADPH2:quinone reductase [EC:1.6.5.5]Probable quinone oxidoreductaseThermus thermophilus 3.90.180.10 138 30 86 1.49 1.72
1o89A01 87.17 Putative quinone oxidoreductase yhdHEscherichia coli K-12 3.90.180.10 153 18 92 2.35 2.55
1v3vA01 82.80 Cavia porcellusProstaglandin reductase 1 3.90.180.10 155 12 90 2.96 3.27
2xaaC01 82.14 Rhodococcus ruberSecondary alcohol dehydrogenase 3.90.180.10 208 23 71 2.21 3.09
1piwA01 80.50 NADP-dependent alcohol dehydrogenase 6Alcohol dehydrogenase (NADP+) activityAlcohol metabolic processHydroxymethylfurfural reductase (NADH) activitySoluble fraction 3.90.180.10 223 22 68 2.35 3.43
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Displaying entries 1 to 5 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1yb5A01
KLMRAVRVFEFGGPEVLKLRSDIAVPIPKDHQVLIKVHACGVNPVETYIRSGTYSRKPLLPYTPGSDVAGVIEAVGDNAS
AFKKGDRVFTSSTISGGYAEYALAADHTVYKLPEKLDFKQGAAPVIGSQYPLEKVAEAHENIIHGSGATGKMILLL
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1yb5A01
KLMRAVRVFEFGGPEVLKLRSDIAVPIPKDHQVLIKVHACGVNPVETYIRSGTYSRKPLLPYTPGSDVAGVIEAVGDNAS
AFKKGDRVFTSSTISGGYAEYALAADHTVYKLPEKLDFKQGAAPVIGSQYPLEKVAEAHENIIHGSGATGKMILLL
BLAST against CATH

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Domain History Events (3)

Insertion by sillitoe on 06 Mar 2006 15:40

HomCheck 'Assigned H' domains

Flow stage update by sillitoe on 06 Mar 2006 15:40

HomCheck 'Assigned H' domains

Insertion by auto on 06 Mar 2006 00:26

Cut based on decision in database "DomChop" on "cathdb"