CATH Domain: 1y7tA02 XML data for domain: 1y7tA02

Molscript image for 1y7tA02
1y7tA02
PDB coordinates for domain 1y7tA02

PDB 1y7t, Chain A, Domain 2

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.90 Alpha-Beta Complex
3.90.110 L-2-Hydroxyisocaproate Dehydrogenase; Chain A, domain 2
3.90.110.10 L-2-Hydroxyisocaproate Dehydrogenase, subunit A, domain 2 Gene3D
3.90.110.10.3
3.90.110.10.3.1
3.90.110.10.3.1.1
3.90.110.10.3.1.1.1
3.90.110.10.3.1.1.1.1

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Segment boundaries for domain 1y7tA02

Chopping figure for domain 1y7tA02
DomainStart PDB ResidueStop PDB Residue
1y7tA01 1 153
1y7tA02 154 331

Structural Neighbourhood (6 entries)

There are 6 matching structural neighberhood comparisons for CATH ID 3.90.110.10.3.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 6 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
3h3jA02 85.76 Pyruvate metabolismPropanoate metabolismMetabolic pathwaysCysteine and methionine metabolismGlycolysis / Gluconeogenesis 3.90.110.10 167 19 94 2.43 2.58
1o6zA01 84.90 Malate dehydrogenase [EC:1.1.1.37]Citrate cycle (TCA cycle)Pyruvate metabolismHaloarcula marismortuiGlyoxylate and dicarboxylate metabolism 3.90.110.10 161 16 93 2.43 2.61
2x0jA02 84.41 Malate dehydrogenase [EC:1.1.1.37]Citrate cycle (TCA cycle)Archaeoglobus fulgidusPyruvate metabolismMetabolic pathways 3.90.110.10 152 21 88 2.37 2.68
1hyeA02 84.41 Malate dehydrogenase [EC:1.1.1.37]Citrate cycle (TCA cycle)Methanocaldococcus jannaschiiPyruvate metabolismMetabolic pathways 3.90.110.10 157 22 90 2.91 3.21
1hyhC02 83.21 Weissella confusaL-2-hydroxyisocaproate dehydrogenase 3.90.110.10 157 12 89 2.53 2.83
6ldhA02 82.07 Squalus acanthiasL-lactate dehydrogenase A chain 3.90.110.10 167 12 94 2.55 2.71
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Displaying entries 1 to 6 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1y7tA02
MTRLDHNRAKAQLAKKTGTGVDRIRRMTVWGNHSSTMFPDLFHAEVDGRPALELVDMEWYEKVFIPTVAQRGAAIIQARG
ASSAASAANAAIEHIRDWALGTPEGDWVSMAVPSQGEYGIPEGIVYSFPVTAKDGAYRVVEGLEINEFARKRMEITAQEL
LDEMEQVKALGL
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1y7tA02
MTRLDHNRAKAQLAKKTGTGVDRIRRMTVWGNHSSTMFPDLFHAEVDGRPALELVDMEWYEKVFIPTVAQRGAAIIQARG
ASSAASAANAAIEHIRDWALGTPEGDWVSMAVPSQGEYGIPEGIVYSFPVTAKDGAYRVVEGLEINEFARKRMEITAQEL
LDEMEQVKALGL
BLAST against CATH

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Domain History Events (5)

Domain assigned by auto on 28 Apr 2006 20:33

Assigning to "3.90.110.10" based on similarity with "1iz9B02" (NWSI: 100, NWO: 100, SPS: 98.55, SPO: 100, RMSD: 0.30)

Flow stage update by auto on 28 Apr 2006 17:50

NW result present for Domain "1y7tA02"

Flow stage update by auto on 28 Apr 2006 17:47

All required files are present for Domain "1y7tA02"

Flow stage update by auto on 27 Apr 2006 17:32

Beginning processing for Domain "1y7tA02"

Insertion by auto on 09 Mar 2006 22:35

Final ChopClose added based on similarity with "1iz9A" [LEE: 0, LME: 0, MR: 0, LG: 0, SS: 98.23, SI: 100, SO: 100]