CATH Domain: 1xu1A00 XML data for domain: 1xu1A00

Molscript image for 1xu1A00
1xu1A00
PDB coordinates for domain 1xu1A00

PDB 1xu1, Chain A, Domain 0

CATH CodeLevel DescriptionLinks
2 Mainly Beta
2.60 Sandwich
2.60.120 Jelly Rolls
2.60.120.40 Gene3D
2.60.120.40.4
2.60.120.40.4.1
2.60.120.40.4.1.1
2.60.120.40.4.1.1.1
2.60.120.40.4.1.1.1.1

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Segment boundaries for domain 1xu1A00

Chopping figure for domain 1xu1A00
DomainStart PDB ResidueStop PDB Residue
1xu1A00 105 241

Structural Neighbourhood (10 entries)

There are 10 matching structural neighberhood comparisons for CATH ID 2.60.120.40.4.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 10 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1rj8A00 87.14 Membrane fractionEctodysplasin-ACytoskeletonSignal transductionEctodysplasin-A 2.60.120.40 140 25 92 2.68 2.89
1tnrA00 86.39 Lymphotoxin-alphaType I diabetes mellitusSignal transductionLymphotoxin alpha (TNF superfamily, member 1)Induction of apoptosis 2.60.120.40 144 20 88 2.53 2.85
1alyA00 85.69 Soluble fractionAutoimmune thyroid diseaseIntestinal immune network for IgA productionAllograft rejectionT cell receptor signaling pathway 2.60.120.40 146 18 90 2.11 2.33
1s55A00 84.96 Mammary gland epithelial cell proliferationOssificationOrgan morphogenesisLymph node developmentProtein homooligomerization 2.60.120.40 156 18 85 2.50 2.91
1o91A00 83.86 Mus musculusCamera-type eye morphogenesisCollagen alpha-1(VIII) chainEpithelial cell proliferationPositive regulation of cell-substrate adhesion 2.60.120.40 131 11 91 3.00 3.29
2q8oA00 83.53 Mus musculusGITR ligand 2.60.120.40 125 14 78 2.10 2.66
1h6yA00 76.16 Clostridium thermocellumEndo-1,4-beta-xylanase YProtein binding 2.60.120.260 157 4 69 2.96 4.26
1w0nA00 75.71 Arabinoxylan arabinofuranohydrolasePaenibacillus polymyxa 2.60.120.260 120 5 73 3.64 4.94
1pgsA01 75.02 Elizabethkingia miricolaPeptide-N(4)-(N-acetyl-beta-D-glucosaminyl)asparagine amidase F 2.60.120.230 135 6 78 3.60 4.57
1guiA00 72.76 Thermotoga maritimaLaminarinase 2.60.120.260 155 5 65 3.26 4.95
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Displaying entries 1 to 10 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1xu1A00
KHSVLHLVPVNITSKADSDVTEVMWQPVLRRGRGLEAQGDIVRVWDTGIYLLYSQVLFHDVTFTMGQVVSREGQGRRETL
FRCIRSMPSDPDRAYNSCYSAGVFHLHQGDIITVKIPRANAKLSLSPHGTFLGFVKL
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1xu1A00
KKHSVLHLVPVNITSKADSDVTEVMWQPVLRRGRGLEAQGDIVRVWDTGIYLLYSQVLFHDVTFTMGQVVSREGQGRRET
LFRCIRSMPSDPDRAYNSCYSAGVFHLHQGDIITVKIPRANAKLSLSPHGTFLGFVKL
BLAST against CATH

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Domain History Events (5)

Domain assigned by auto on 28 Apr 2006 20:14

Assigning to "2.60.120.40" based on similarity with "1xu1D00" (NWSI: 100, NWO: 100, SPS: 98.62, SPO: 100, RMSD: 0.23)

Flow stage update by auto on 28 Apr 2006 17:50

NW result present for Domain "1xu1A00"

Flow stage update by auto on 28 Apr 2006 17:46

All required files are present for Domain "1xu1A00"

Flow stage update by auto on 27 Apr 2006 17:32

Beginning processing for Domain "1xu1A00"

Insertion by auto on 09 Mar 2006 19:45

Final ChopClose added based on similarity with "1xu1B" [LEE: 0, LME: 0, MR: 0, LG: 0, SS: 98.51, SI: 100, SO: 100]