CATH Domain: 1xphA00 XML data for domain: 1xphA00

Molscript image for 1xphA00
1xphA00
PDB coordinates for domain 1xphA00

PDB 1xph, Chain A, Domain 0

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.10 Roll
3.10.100 Mannose-Binding Protein A; Chain A
3.10.100.10 Mannose-Binding Protein A, subunit A Gene3D
3.10.100.10.4
3.10.100.10.4.1
3.10.100.10.4.1.1
3.10.100.10.4.1.1.1
3.10.100.10.4.1.1.1.1

Segment boundaries for domain 1xphA00

Chopping figure for domain 1xphA00
DomainStart PDB ResidueStop PDB Residue
1xphA00 260 398

Structural Neighbourhood (17 entries)

There are 17 matching structural neighberhood comparisons for CATH ID 3.10.100.10.4.1.1.1.1 (SIMAX score < 5)

Displaying entries 1 to 17 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1sl6A00 91.56 Integral to plasma membraneCell-cell recognitionVirion attachment to host cell surface receptorVirion bindingHomo sapiens 3.10.100.10 168 99 82 1.59 1.94
2h2tB01 89.05 Positive regulation of nitric-oxide synthase 2 biosynthetic processIntegral to plasma membraneHematopoietic cell lineagePositive regulation of nitric-oxide synthase activityPositive regulation of killing of cells of another organism 3.10.100.10 116 37 82 1.59 1.94
1byfA00 88.30 LectinPolyandrocarpa misakiensis 3.10.100.10 123 21 84 1.99 2.36
1jznA00 88.20 Galactose-specific lectinCrotalus atrox 3.10.100.10 135 23 89 2.17 2.41
1qddA00 88.16 Positive regulation of cell proliferationHomo sapiensGrowth factor activityLithostathine-1-alpha 3.10.100.10 144 23 90 2.52 2.77
1wmzA00 88.12 Cucumaria echinataLectin CEL-I, N-acetyl-D-galactosamine-specific C-type 3.10.100.10 140 26 90 2.41 2.68
1hq8A00 87.53 Positive regulation of interferon-gamma productionPositive regulation of natural killer cell mediated cytotoxicityPositive regulation of nitric oxide biosynthetic processMHC class I protein bindingNatural killer cell activation 3.10.100.10 123 33 87 2.08 2.37
3hupA00 87.52 CD69 antigenIntegral to plasma membraneEarly activation antigen CD69Homo sapiensTransmembrane receptor activity 3.10.100.10 114 30 82 2.34 2.85
1kza100 87.36 Rattus norvegicusMannose bindingProtein self-associationMannose-binding lectinMannose-binding protein C 3.10.100.10 115 22 81 1.85 2.28
1tn3A00 87.11 Skeletal system developmentHomo sapiensTetranectinProtein binding 3.10.100.10 135 21 88 2.28 2.58
3bdwA00 86.74 Killer cell lectin-like receptor subfamily D, member 1Natural killer cell mediated cytotoxicityNatural killer cells antigen CD94Antigen processing and presentationGraft-versus-host disease 3.10.100.10 123 27 87 2.48 2.83
1gz2A00 86.55 Peptidoglycan bindingShell calcificationLipopolysaccharide bindingGram-positive bacterial cell surface bindingOvocleidin-17 3.10.100.10 138 19 88 2.26 2.55
1g1tA01 86.32 Response to tumor necrosis factorCoated pitHeterophilic cell-cell adhesionPerinuclear region of cytoplasmPhospholipase binding 3.10.100.10 119 29 79 1.94 2.43
1h8uB00 85.75 Bone marrow proteoglycanHomo sapiensBone marrow proteoglycanExtracellular regionSugar binding 3.10.100.10 116 24 79 1.99 2.51
1rtm100 85.52 Calcium ion bindingMannose bindingRattus norvegicusProtein homodimerization activityExtracellular space 3.10.100.10 149 21 85 3.70 4.31
1pwbC00 85.51 Negative regulation of T cell proliferationProtein bindingInnate immune responseLung alveolus developmentEndocytic vesicle 3.10.100.10 150 20 86 3.42 3.98
1eslA00 83.88 Response to tumor necrosis factorCoated pitHeterophilic cell-cell adhesionPerinuclear region of cytoplasmPhospholipase binding 3.10.100.10 157 25 75 3.61 4.80
Displaying entries 1 to 17 (page 1 of 1)


Domain ATOM Sequence

>pdb|1xphA00
AFERLCRHCPKDWTFFQGNCYFMSNSQRNWHDSVTACQEVRAQLVVIKTAEEQNFLQLQTSRSNRFSWMGLSDLNQEGTW
QWVDGSPLSPSFQRYWNSGEPNNSGNEDCAEFSGSGWNDNRCDVDNYWICKKPAACFRD    

Domain COMBS Sequence

>pdb|1xphA00
IYQELTDLKTAFERLCRHCPKDWTFFQGNCYFMSNSQRNWHDSVTACQEVRAQLVVIKTAEEQNFLQLQTSRSNRFSWMG
LSDLNQEGTWQWVDGSPLSPSFQRYWNSGEPNNSGNEDCAEFSGSGWNDNRCDVDNYWICKKPAACFRDE    

Domain History Events (5)

Domain assigned by auto on 28 Apr 2006 20:10

Assigning to "3.10.100.10" based on similarity with "1k9jB00" (NWSI: 99.2805755395683, NWO: 92.6666666666667, SPS: 94.03, SPO: 92, RMSD: 1.29)

Flow stage update by auto on 28 Apr 2006 17:50

NW result present for Domain "1xphA00"

Flow stage update by auto on 28 Apr 2006 17:46

All required files are present for Domain "1xphA00"

Flow stage update by auto on 27 Apr 2006 17:32

Beginning processing for Domain "1xphA00"

Insertion by auto on 09 Mar 2006 18:48

Final ChopClose added based on similarity with "1k9jA" [LEE: 5, LME: 0, MR: 0, LG: 5, SS: 94.88, SI: 99.2805755395683, SO: 92.6666666666667]