CATH Domain: 1xk4E00 XML data for domain: 1xk4E00

Molscript image for 1xk4E00
1xk4E00
PDB coordinates for domain 1xk4E00

PDB 1xk4, Chain E, Domain 0

CATH CodeLevel DescriptionLinks
1 Mainly Alpha
1.10 Orthogonal Bundle
1.10.238 Recoverin; domain 1
1.10.238.10 EF-hand Gene3D
1.10.238.10.14
1.10.238.10.14.1
1.10.238.10.14.1.1
1.10.238.10.14.1.1.1
1.10.238.10.14.1.1.1.1

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Segment boundaries for domain 1xk4E00

Chopping figure for domain 1xk4E00
DomainStart PDB ResidueStop PDB Residue
1xk4E00 1 89

Structural Neighbourhood (17 entries)

There are 17 matching structural neighberhood comparisons for CATH ID 1.10.238.10.14.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 17 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1a4pA00 90.17 Protein S100-A10Homo sapiens 1.10.238.10 92 24 92 2.10 2.27
1qx2A00 88.17 Protein S100-GBos taurus 1.10.238.10 75 25 82 1.96 2.39
1topA02 85.14 Gallus gallusTroponin C, skeletal muscle 1.10.238.10 87 13 85 3.75 4.39
1g33A00 83.75 Rattus norvegicusParvalbumin alpha 1.10.238.10 73 20 79 3.54 4.44
2f3yA02 82.97 Phosphatidylinositol signaling systemCalcium signaling pathwayOocyte meiosisMelanogenesisInsulin signaling pathway 1.10.238.10 68 17 76 3.59 4.70
1qtxA02 82.55 1.10.238.10 68 16 76 3.73 4.88
1dtlA02 82.53 Cardiac muscle contractionCalcium signaling pathwayTroponin C, slow skeletal and cardiac musclesGallus gallusTroponin C, slow skeletal and cardiac muscles 1.10.238.10 63 20 70 3.31 4.68
1eg3A04 81.85 Cell surfaceCostamereCytoskeletonDystrophin-associated glycoprotein complexActin binding 1.10.238.10 82 6 80 3.33 4.12
1jfjA01 81.06 Entamoeba histolyticaCalcium-binding protein 1.10.238.10 63 14 70 2.63 3.72
1tizA00 80.93 Calcium-binding protein CMLArabidopsis thalianaPlant-pathogen interactionProbable calcium-binding protein CML34 1.10.238.10 66 24 74 2.38 3.21
2bl0B01 79.65 Physarum polycephalumMyosin regulatory light chain 1.10.238.10 68 10 76 3.60 4.71
1uurA03 79.55 Protein homodimerization activityNucleusSignal transducer and activator of transcription APositive regulation of transcriptionCytosol 1.10.238.10 88 4 86 3.61 4.17
1wdcC01 78.93 Myosin essential light chain, striated adductor muscleArgopecten irradians 1.10.238.10 78 12 84 4.17 4.95
1k90E01 77.54 Phosphatidylinositol signaling systemCalcium signaling pathwayOocyte meiosisMelanogenesisInsulin signaling pathway 1.10.238.10 74 12 83 2.91 3.50
1m45A01 76.75 Vesicle targetingIdentical protein bindingProtein localizationMyosin II heavy chain bindingMyosin light chain 1 1.10.238.10 67 8 74 3.47 4.68
1djxB01 76.01 Calcium ion bindingCalcium signaling pathwayPhosphatidylinositol signaling systemRattus norvegicusElevation of cytosolic calcium ion concentration involved in G-protein signaling coupled to IP3 second messenger 1.10.238.10 52 17 58 2.34 4.00
1s26D01 75.29 Calcium signaling pathwayPhosphatidylinositol signaling systemOocyte meiosisMelanogenesisInsulin signaling pathway 1.10.238.10 59 15 66 2.49 3.76
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Displaying entries 1 to 17 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1xk4E00
MLTELEKALNSIIDVYHKYSLIKGNFHAVYRDDLKKLLETESPQYIRKKGADVWFKELDINTDGAVNFQEFLILVIKMGV
AAHKKSHEE
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1xk4E00
MLTELEKALNSIIDVYHKYSLIKGNFHAVYRDDLKKLLETESPQYIRKKGADVWFKELDINTDGAVNFQEFLILVIKMGV
AAHKKSHEESHKE
BLAST against CATH

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Domain History Events (5)

Domain assigned by auto on 28 Apr 2006 20:01

Assigning to "1.10.238.10" based on similarity with "1mr8B00" (NWSI: 98.9247311827957, NWO: 100, SPS: 95.70, SPO: 98, RMSD: 0.86)

Flow stage update by auto on 28 Apr 2006 17:50

NW result present for Domain "1xk4E00"

Flow stage update by auto on 28 Apr 2006 17:46

All required files are present for Domain "1xk4E00"

Flow stage update by auto on 27 Apr 2006 17:31

Beginning processing for Domain "1xk4E00"

Insertion by auto on 09 Mar 2006 17:39

Final ChopClose added based on similarity with "1mr8A" [LEE: 0, LME: 0, MR: 1, LG: 1, SS: 96.58, SI: 98.9247311827957, SO: 100]