CATH Domain: 1xk4D00 XML data for domain: 1xk4D00

Molscript image for 1xk4D00
1xk4D00
PDB coordinates for domain 1xk4D00

PDB 1xk4, Chain D, Domain 0

CATH CodeLevel DescriptionLinks
1 Mainly Alpha
1.10 Orthogonal Bundle
1.10.238 Recoverin; domain 1
1.10.238.10 EF-hand Gene3D
1.10.238.10.11
1.10.238.10.11.2
1.10.238.10.11.2.1
1.10.238.10.11.2.1.1
1.10.238.10.11.2.1.1.1

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Segment boundaries for domain 1xk4D00

Chopping figure for domain 1xk4D00
DomainStart PDB ResidueStop PDB Residue
1xk4D00 4 95

Structural Neighbourhood (4 entries)

There are 4 matching structural neighberhood comparisons for CATH ID 1.10.238.10.11.2.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 4 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1xk4E00 87.29 Protein S100-A8Calcium ion bindingHomo sapiensInflammatory responseProtein binding 1.10.238.10 89 39 95 3.92 4.10
1a4pA00 82.05 Protein S100-A10Homo sapiens 1.10.238.10 92 20 91 4.43 4.85
1ncxA01 81.06 Gallus gallusTroponin C, skeletal muscle 1.10.238.10 90 15 82 3.94 4.77
1wdcC01 79.93 Myosin essential light chain, striated adductor muscleArgopecten irradians 1.10.238.10 78 10 84 4.17 4.92
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Displaying entries 1 to 4 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1xk4D00
KMSQLERNIETIINTFHQYSVKLGHPDTLNQGEFKELVRKDLQNFLKKENKNEKVIEHIMEDLDTNADKQLSFEEFIMLM
ARLTWASHEKMH
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1xk4D00
TSKMSQLERNIETIINTFHQYSVKLGHPDTLNQGEFKELVRKDLQNFLKKENKNEKVIEHIMEDLDTNADKQLSFEEFIM
LMARLTWASHEKMH
BLAST against CATH

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Domain History Events (5)

Domain assigned by auto on 28 Apr 2006 20:01

Assigning to "1.10.238.10" based on similarity with "1xk4K00" (NWSI: 100, NWO: 100, SPS: 99.00, SPO: 100, RMSD: 0.15)

Flow stage update by auto on 28 Apr 2006 17:50

NW result present for Domain "1xk4D00"

Flow stage update by auto on 28 Apr 2006 17:46

All required files are present for Domain "1xk4D00"

Flow stage update by auto on 27 Apr 2006 17:31

Beginning processing for Domain "1xk4D00"

Insertion by auto on 09 Mar 2006 17:39

Final ChopClose added based on similarity with "1xk4C" [LEE: 3, LME: 0, MR: 0, LG: 3, SS: 98.55, SI: 100, SO: 96.8085106382979]