CATH Domain: 1xgsA02 XML data for domain: 1xgsA02

Molscript image for 1xgsA02
1xgsA02
PDB coordinates for domain 1xgsA02

PDB 1xgs, Chain A, Domain 2

CATH CodeLevel DescriptionLinks
1 Mainly Alpha
1.10 Orthogonal Bundle
1.10.10 Arc Repressor Mutant, subunit A
1.10.10.10 "winged helix" repressor DNA binding domain Gene3D
1.10.10.10.14
1.10.10.10.14.1
1.10.10.10.14.1.1
1.10.10.10.14.1.1.1
1.10.10.10.14.1.1.1.1

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Segment boundaries for domain 1xgsA02

Chopping figure for domain 1xgsA02
DomainStart PDB ResidueStop PDB Residue
1xgsA01 1 194
1xgsA01 272 295
1xgsA02 195 271

Structural Neighbourhood (3 entries)

There are 3 matching structural neighberhood comparisons for CATH ID 1.10.10.10.14.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 3 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
3fm3A02 89.82 Methionine aminopeptidase 2Methionyl aminopeptidase [EC:3.4.11.18]Encephalitozoon cuniculi 1.10.10.10 80 23 96 2.03 2.11
3bz6A02 80.39 Hypothetical proteinPseudomonas syringae pv. tomatoUPF0502 protein PSPTO_2686 1.10.10.10 76 11 70 3.50 4.99
3dfgA03 74.02 Xanthomonas campestris pv. campestrisRegulatory proteinRegulatory protein recX 1.10.10.10 48 12 51 2.56 4.93
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Displaying entries 1 to 3 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1xgsA02
GQVIEVPPTLIYMYVRDVPVRVAQARFLLAKIKREYGTLPFAYRWLQNDMPEGQLKLALKTLEKAGAIYGYPVLKEI
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1xgsA02
GQVIEVPPTLIYMYVRDVPVRVAQARFLLAKIKREYGTLPFAYRWLQNDMPEGQLKLALKTLEKAGAIYGYPVLKEI
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 18:02

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 18:02

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 17:52

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"