CATH Domain: 1xfcB02 XML data for domain: 1xfcB02

Molscript image for 1xfcB02
1xfcB02
PDB coordinates for domain 1xfcB02

PDB 1xfc, Chain B, Domain 2

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.20 Alpha-Beta Barrel
3.20.20 TIM Barrel
3.20.20.10 Alanine racemase Gene3D
3.20.20.10.6
3.20.20.10.6.1
3.20.20.10.6.1.1
3.20.20.10.6.1.1.1
3.20.20.10.6.1.1.1.1

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Segment boundaries for domain 1xfcB02

Chopping figure for domain 1xfcB02
DomainStart PDB ResidueStop PDB Residue
1xfcB01 11 17
1xfcB01 250 381
1xfcB02 18 233

Structural Neighbourhood (9 entries)

There are 9 matching structural neighberhood comparisons for CATH ID 3.20.20.10.6.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 9 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1ct5A00 82.55 UPF0001 protein YBL036CIdentical protein bindingPyridoxal phosphate bindingSaccharomyces cerevisiae 3.20.20.10 225 12 87 2.49 2.84
1w8gA00 82.23 UPF0001 protein yggSEscherichia coli K-12 3.20.20.10 226 16 89 2.71 3.02
2p3eA02 81.26 Diaminopimelate decarboxylase [EC:4.1.1.20]Diaminopimelate decarboxylaseMetabolic pathwaysLysine biosynthesisAquifex aeolicus 3.20.20.10 223 13 90 2.83 3.12
1knwA02 79.82 Lysine biosynthesisMetabolic pathwaysDiaminopimelate decarboxylase [EC:4.1.1.20]Diaminopimelate decarboxylaseProtein binding 3.20.20.10 244 12 79 2.52 3.15
2o0tA02 78.09 Lysine biosynthesisMetabolic pathwaysDiaminopimelate decarboxylase [EC:4.1.1.20]Diaminopimelate decarboxylaseMycobacterium tuberculosis 3.20.20.10 260 16 78 3.04 3.89
1tqjC00 77.27 Ribulose-phosphate 3-epimerasePentose phosphate pathwayPentose and glucuronate interconversionsCarbon fixation in photosynthetic organismsRibulose-phosphate 3-epimerase [EC:5.1.3.1] 3.20.20.70 218 9 78 3.21 4.07
2fliC00 76.80 Pentose phosphate pathwayPentose and glucuronate interconversionsMetabolic pathwaysRibulose-phosphate 3-epimerase [EC:5.1.3.1]Streptococcus pyogenes serotype M1 3.20.20.70 219 6 80 3.98 4.92
3f4wA00 76.06 Pentose and glucuronate interconversionsMethane metabolismPutative hexulose 6 phosphate synthaseSalmonella enterica subsp. enterica serovar Typhimurium3-hexulose-6-phosphate synthase [EC:4.1.2.43] 3.20.20.70 211 11 78 3.61 4.59
1q6oB00 75.73 Ascorbate and aldarate metabolism3-keto-L-gulonate-6-phosphate decarboxylase ulaDMagnesium ion binding3-dehydro-L-gulonate-6-phosphate decarboxylase [EC:4.1.1.85]3-dehydro-L-gulonate-6-phosphate decarboxylase activity 3.20.20.70 215 8 80 3.74 4.64
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Displaying entries 1 to 9 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1xfcB02
LGAIEHNVRVLREHAGHAQLMAVVKADGYGHGATRVAQTALGAGAAELGVATVDEALALRADGITAPVLAWLHPPGIDFG
PALLADVQVAVSSLRQLDELLHAVRRTGRTATVTVKVDTGLNRNGVGPAQFPAMLTALRQAMAEDAVRLRGLMSHMVYAD
KPDDSINDVQAQRFTAFLAQAREQGVRFEVAHLSNSSATMARPDLTFDLVRPGIAV
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1xfcB02
LGAIEHNVRVLREHAGHAQLMAVVKADGYGHGATRVAQTALGAGAAELGVATVDEALALRADGITAPVLAWLHPPGIDFG
PALLADVQVAVSSLRQLDELLHAVRRTGRTATVTVKVDTGLNRNGVGPAQFPAMLTALRQAMAEDAVRLRGLMSHMVYAD
KPDDSINDVQAQRFTAFLAQAREQGVRFEVAHLSNSSATMARPDLTFDLVRPGIAV
BLAST against CATH

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Domain History Events (6)

Domain assigned by auto on 20 Jul 2007 16:12

Assigning to "3.20.20.10" based on similarity with "1bd0A01"

Flow stage update by auto on 20 Jul 2007 02:44

No in_process hits for Domain "1xfcB02" ready to be processed

Flow stage update by auto on 20 Jul 2007 02:44

NW result present for Domain "1xfcB02"

Flow stage update by auto on 14 Jul 2007 06:01

All required files are present for Domain "1xfcB02"

Flow stage update by auto on 13 Jul 2007 18:42

Beginning processing for Domain "1xfcB02"

Insertion by auto on 13 Jul 2007 00:14

Final ChopClose added based on similarity with "1bd0B"