CATH Domain: 1xeoA00 XML data for domain: 1xeoA00

Molscript image for 1xeoA00
1xeoA00
PDB coordinates for domain 1xeoA00

PDB 1xeo, Chain A, Domain 0

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.90 Alpha-Beta Complex
3.90.45 Peptide Deformylase
3.90.45.10 Peptide Deformylase Gene3D
3.90.45.10.1
3.90.45.10.1.1
3.90.45.10.1.1.1
3.90.45.10.1.1.1.1
3.90.45.10.1.1.1.1.1

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Segment boundaries for domain 1xeoA00

Chopping figure for domain 1xeoA00
DomainStart PDB ResidueStop PDB Residue
1xeoA00 1 165

Structural Neighbourhood (3 entries)

There are 3 matching structural neighberhood comparisons for CATH ID 3.90.45.10.1.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 3 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1lmeA00 91.22 Thermotoga maritimaPeptide deformylase[EC:3.5.1.88] 3.90.45.10 153 37 87 1.48 1.70
1rl4B00 91.11 Plasmodium falciparum 3D7Formylmethionine deformylase, putativeFormylmethionine deformylase [EC:3.5.1.31]Cysteine and methionine metabolismGlyoxylate and dicarboxylate metabolism 3.90.45.10 156 33 92 1.47 1.60
1v3yA00 91.08 Peptide deformylase[EC:3.5.1.88]Thermus thermophilus 3.90.45.10 169 33 96 2.21 2.29
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Displaying entries 1 to 3 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1xeoA00
SVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDVSENRDERLVLINPELLEK
SGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEK
LDRLK
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1xeoA00
SVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDVSENRDERLVLINPELLEK
SGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEK
LDRLKARA
BLAST against CATH

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Domain History Events (5)

Domain assigned by auto on 28 Apr 2006 19:55

Assigning to "3.90.45.10" based on similarity with "1bs8B00" (NWSI: 100, NWO: 100, SPS: 97.41, SPO: 98, RMSD: 0.38)

Flow stage update by auto on 28 Apr 2006 17:50

NW result present for Domain "1xeoA00"

Flow stage update by auto on 28 Apr 2006 17:46

All required files are present for Domain "1xeoA00"

Flow stage update by auto on 27 Apr 2006 17:31

Beginning processing for Domain "1xeoA00"

Insertion by auto on 09 Mar 2006 15:12

Final ChopClose added based on similarity with "1bs4A" [LEE: 0, LME: 0, MR: 3, LG: 3, SS: 97.51, SI: 100, SO: 100]