CATH Domain: 1xdnA01 XML data for domain: 1xdnA01

Molscript image for 1xdnA01
1xdnA01
PDB coordinates for domain 1xdnA01

PDB 1xdn, Chain A, Domain 1

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.30 2-Layer Sandwich
3.30.1490 Dna Ligase; domain 1
3.30.1490.70 Gene3D
3.30.1490.70.1
3.30.1490.70.1.1
3.30.1490.70.1.1.1
3.30.1490.70.1.1.1.1
3.30.1490.70.1.1.1.1.1

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Segment boundaries for domain 1xdnA01

Chopping figure for domain 1xdnA01
DomainStart PDB ResidueStop PDB Residue
1xdnA01 52 89
1xdnA01 245 316
1xdnA02 90 244

Structural Neighbourhood (1 entries)

There are 1 matching structural neighberhood comparisons for CATH ID 3.30.1490.70.1.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 1 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1s68A01 83.84 RNA ligase 2Enterobacteria phage T4 3.30.1490.70 114 23 84 4.04 4.80
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Displaying entries 1 to 1 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1xdnA01
QSDFSPYIEIDLPSESRIQSLHKSGLAAQEWVACEKVHALVRGTLDECLAFDVENFTPLPALLGLGNYPLEGNLAEGVVI
RHVRRGDPAVEKHNVSTIIKLRCSSFEL
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1xdnA01
GHMDQSDFSPYIEIDLPSESRIQSLHKSGLAAQEWVACEKVHALVRGTLDECLAFDVENFXTPLPALLGLGNYPLEGNLA
EGVVIRHVRRGDPAVEKHNVSTIIKLRCSSFXELKHPGKQKE
BLAST against CATH

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Domain History Events (3)

Insertion by sillitoe on 06 Mar 2006 15:40

HomCheck 'Assigned H' domains

Flow stage update by sillitoe on 06 Mar 2006 15:40

HomCheck 'Assigned H' domains

Insertion by auto on 06 Mar 2006 00:19

Cut based on decision in database "DomChop" on "cathdb"