CATH Domain: 1x9dA00 XML data for domain: 1x9dA00

Molscript image for 1x9dA00
1x9dA00
PDB coordinates for domain 1x9dA00

PDB 1x9d, Chain A, Domain 0

CATH CodeLevel DescriptionLinks
1 Mainly Alpha
1.50 Alpha/alpha barrel
1.50.10 Glycosyltransferase
1.50.10.50 Gene3D
1.50.10.50.2
1.50.10.50.2.1
1.50.10.50.2.1.1
1.50.10.50.2.1.1.1
1.50.10.50.2.1.1.1.1

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Segment boundaries for domain 1x9dA00

Chopping figure for domain 1x9dA00
DomainStart PDB ResidueStop PDB Residue
1x9dA00 245 697

Structural Neighbourhood (1 entries)

There are 1 matching structural neighberhood comparisons for CATH ID 1.50.10.50.2.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 1 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
2ri9A00 88.69 Penicillium citrinumMannosyl-oligosaccharide alpha-1,2-mannosidase 1.50.10.50 475 29 93 1.79 1.92
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Displaying entries 1 to 1 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1x9dA00
HLNYRQKGVIDVFLHAWKGYRKFAWGHDELKPVSRSFSEWFGLGLTLIDALDTMWILGLRKEFEEARKWVSKKLHFEKDV
DVNLFESTIRILGGLLSAYHLSGDSLFLRKAEDFGNRLMPAFRTPSKIPYSDVNIGTGVAHPPRWTSDSTVAEVTSIQLE
FRELSRLTGDKKFQEAVEKVTQHIHGLSGKKDGLVPMFINTHSGLFTHLGVFTLGARADSYYEYLLKQWIQGGKQETQLL
EDYVEAIEGVRTHLLRHSEPSKLTFVGELAHGRFSAKMDHLVCFLPGTLALGVYHGLPASHMELAQELMETCYQMNRQME
TGLSPEIVHFNLYPQPGRRDVEVKPADRHNLLRPETVESLFYLYRVTGDRKYQDWGWEILQSFSRFTRVPSGGYSSINNV
QDPQKPEPRDKMESFFLGETLKYLFLLFSDDNLLSLDAYVFNTEAHPLPIWT
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1x9dA00
HLNYRQKGVIDVFLHAWKGYRKFAWGHDELKPVSRSFSEWFGLGLTLIDALDTMWILGLRKEFEEARKWVSKKLHFEKDV
DVNLFESTIRILGGLLSAYHLSGDSLFLRKAEDFGNRLMPAFRTPSKIPYSDVNIGTGVAHPPRWTSDSTVAEVTSIQLE
FRELSRLTGDKKFQEAVEKVTQHIHGLSGKKDGLVPMFINTHSGLFTHLGVFTLGARADSYYEYLLKQWIQGGKQETQLL
EDYVEAIEGVRTHLLRHSEPSKLTFVGELAHGRFSAKMDHLVCFLPGTLALGVYHGLPASHMELAQELMETCYQMNRQME
TGLSPEIVHFNLYPQPGRRDVEVKPADRHNLLRPETVESLFYLYRVTGDRKYQDWGWEILQSFSRFTRVPSGGYSSINNV
QDPQKPEPRDKMESFFLGETLKYLFLLFSDDPNLLSLDAYVFNTEAHPLPIWTPA
BLAST against CATH

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Domain History Events (5)

Domain assigned by auto on 28 Apr 2006 19:49

Assigning to "1.50.10.50" based on similarity with "1fo2A00" (NWSI: 100, NWO: 98.9130434782609, SPS: 96.49, SPO: 98, RMSD: 0.61)

Flow stage update by auto on 28 Apr 2006 17:50

NW result present for Domain "1x9dA00"

Flow stage update by auto on 28 Apr 2006 17:46

All required files are present for Domain "1x9dA00"

Flow stage update by auto on 27 Apr 2006 17:31

Beginning processing for Domain "1x9dA00"

Insertion by auto on 09 Mar 2006 13:50

Final ChopClose added based on similarity with "1fo2A" [LEE: 1, LME: 0, MR: 5, LG: 5, SS: 96.49, SI: 100, SO: 98.9130434782609]