CATH Domain: 1x5wA01 XML data for domain: 1x5wA01

Molscript image for 1x5wA01
1x5wA01
PDB coordinates for domain 1x5wA01

PDB 1x5w, Chain A, Domain 1

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.30 2-Layer Sandwich
3.30.160 Double Stranded RNA Binding Domain
3.30.160.60 Classic Zinc Finger Gene3D
3.30.160.60.24
3.30.160.60.24.1
3.30.160.60.24.1.1
3.30.160.60.24.1.1.1
3.30.160.60.24.1.1.1.1

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Segment boundaries for domain 1x5wA01

Chopping figure for domain 1x5wA01
DomainStart PDB ResidueStop PDB Residue
1x5wA01 7 34
1x5wA02 35 63

Structural Neighbourhood (7 entries)

There are 7 matching structural neighberhood comparisons for CATH ID 3.30.160.60.24.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 7 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1bbgA00 77.83 Pollen allergen Amb t 5Ambrosia trifida 3.30.160.80 40 17 60 1.71 2.85
1kyqA02 76.56 Identical protein bindingPrecorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase [EC:1.3.1.76 4.99.1.4]Siroheme biosynthetic processMetabolic pathwaysPrecorrin-2 dehydrogenase activity 3.30.160.110 37 3 70 2.39 3.40
3bidA01 76.24 Neisseria meningitidis serogroup BUPF0339 protein NMB1088 3.30.160.160 46 7 60 1.91 3.14
1ncsA00 75.83 Regulation of transcription involved in G1 phase of mitotic cell cycleNucleusProtein bindingTranscriptional factor SWI5Cytoplasm 3.30.160.60 47 17 59 2.26 3.79
1pjqA02 72.86 Porphyrin and chlorophyll metabolismSalmonella enterica subsp. enterica serovar TyphimuriumSiroheme synthaseUroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase [EC:2.1.1.107 1.3.1.76 4.99.1.4]Metabolic pathways 3.30.160.110 35 7 77 3.74 4.85
3c6mC01 68.26 Spermine synthaseArginine and proline metabolismSpermine synthase [EC:2.5.1.22]Glutathione metabolismMetabolic pathways 3.30.160.110 44 3 61 3.03 4.94
1b69A00 68.18 Transposase from transposon Tn916Enterococcus faecalis 3.30.160.60 69 7 40 1.66 4.09
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Displaying entries 1 to 7 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1x5wA01
GHPEKCSECSYSCSSKAALRIHERIHCT
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1x5wA01
GHPEKCSECSYSCSSKAALRIHERIHCT
BLAST against CATH

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Domain History Events (6)

Domain assigned by auto on 26 Apr 2009 17:28

Assigning to "3.30.160.60" based on similarity with "1meyC02"

Flow stage update by auto on 26 Apr 2009 17:08

No in_process hits for Domain "1x5wA01" ready to be processed

Flow stage update by auto on 26 Apr 2009 17:08

NW result present for Domain "1x5wA01"

Flow stage update by auto on 25 Apr 2009 08:08

All required files are present for Domain "1x5wA01"

Flow stage update by auto on 24 Apr 2009 02:31

Beginning processing for Domain "1x5wA01"

Insertion by cuff on 23 Apr 2009 17:37

nice chopping