CATH Domain: 1x3eA00 XML data for domain: 1x3eA00

Molscript image for 1x3eA00
1x3eA00
PDB coordinates for domain 1x3eA00

PDB 1x3e, Chain A, Domain 0

CATH CodeLevel DescriptionLinks
2 Mainly Beta
2.40 Beta Barrel
2.40.50 OB fold (Dihydrolipoamide Acetyltransferase, E2P)
2.40.50.140 Nucleic acid-binding proteins Gene3D
2.40.50.140.18
2.40.50.140.18.1
2.40.50.140.18.1.1
2.40.50.140.18.1.1.1
2.40.50.140.18.1.1.1.1

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Segment boundaries for domain 1x3eA00

Chopping figure for domain 1x3eA00
DomainStart PDB ResidueStop PDB Residue
1x3eA00 3 120

Structural Neighbourhood (14 entries)

There are 14 matching structural neighberhood comparisons for CATH ID 2.40.50.140.18.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 14 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
2vw9B00 87.40 Homologous recombinationDNA replicationHelicobacter pyloriSingle-strand DNA-binding proteinSingle-stranded DNA-binding protein 2.40.50.140 105 25 89 2.30 2.58
3lgjB00 86.43 DNA replicationHomologous recombinationBartonella henselaeSingle-strand DNA-binding proteinSingle-stranded DNA-binding protein 2.40.50.140 96 22 80 2.11 2.61
3ullA00 85.98 DNA replicationPositive regulation of helicase activityMitochondrial nucleoidSingle-stranded DNA-binding protein, mitochondrialHomologous recombination 2.40.50.140 106 14 90 3.40 3.74
2hqlA01 83.63 Uncharacterized protein MG376 homologMycoplasma pneumoniae 2.40.50.140 91 7 82 3.24 3.92
1qvcD00 83.44 Homologous recombinationDNA replicationMismatch repairEscherichia coli O157:H7Single-strand DNA-binding protein 2.40.50.140 140 26 76 2.99 3.91
1ltlA02 83.29 Methanothermobacter thermautotrophicus str. Delta HDNA replication initiator (Cdc21/Cdc54)Replicative DNA helicase Mcm [EC:3.6.1.-] 2.40.50.140 100 15 80 2.78 3.44
2oq0B02 80.64 Gamma-interferon-inducible protein 16NucleolusMonocyte differentiationDouble-stranded DNA bindingProtein binding 2.40.50.140 86 6 65 2.03 3.10
1nnxA00 80.53 Escherichia coli O157:H7Protein ygiW 2.40.50.200 93 13 65 2.78 4.25
1lm0A00 78.10 Cytochrome c-type biogenesis protein ccmECytochrome c-type biogenesis protein CcmEShewanella oneidensis 2.40.50.140 101 9 69 2.55 3.69
1cukA01 77.08 Homologous recombinationHolliday junction ATP-dependent DNA helicase ruvAHolliday junction DNA helicase RuvAEscherichia coli K-12 2.40.50.140 66 7 60 2.58 4.30
2zteA01 76.13 Homologous recombinationHolliday junction ATP-dependent DNA helicase ruvAHolliday junction DNA helicase RuvAMycobacterium tuberculosis 2.40.50.140 65 12 59 2.29 3.88
2ztdA01 74.97 Homologous recombinationHolliday junction ATP-dependent DNA helicase ruvAHolliday junction DNA helicase RuvAMycobacterium tuberculosis 2.40.50.140 71 11 60 2.46 4.10
3d31A02 72.10 Methanosarcina acetivoransPutative sulfate transport system ATP-binding proteinSulfate/molybdate ABC transporter, ATP-binding proteinABC transporters 2.40.50.140 46 8 41 2.09 5.00
1g29102 70.82 Maltose transport protein MalKThermococcus litoralis 2.40.50.140 45 13 40 1.70 4.16
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Displaying entries 1 to 14 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1x3eA00
GDTTITVVGNLTADPELRFTPSGAAVANFTVASTPRMEWKDGEALFLRCNIWREAAENVAESLTRGSRVIVTGRLKQRSF
ETREKRTVVEVEVDEIGPSLRYATAKVNKA
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1x3eA00
MAGDTTITVVGNLTADPELRFTPSGAAVANFTVASTPRMFDRQSGEWKDGEALFLRCNIWREAAENVAESLTRGSRVIVT
GRLKQRSFETREGEKRTVVEVEVDEIGPSLRYATAKVNKA
BLAST against CATH

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Domain History Events (5)

Domain assigned by auto on 28 Apr 2006 21:16

Assigning to "2.40.50.140" based on similarity with "1ue1A00" (NWSI: 94.1666666666667, NWO: 100, SPS: 94.30, SPO: 97, RMSD: 1.06)

Flow stage update by auto on 28 Apr 2006 17:51

NW result present for Domain "1x3eA00"

Flow stage update by auto on 28 Apr 2006 17:48

All required files are present for Domain "1x3eA00"

Flow stage update by auto on 27 Apr 2006 17:32

Beginning processing for Domain "1x3eA00"

Insertion by auto on 10 Mar 2006 08:48

Final ChopClose added based on similarity with "1x3eB" [LEE: 0, LME: 0, MR: 1, LG: 6, SS: 93.16, SI: 100, SO: 100]