CATH Domain: 1x38A01 XML data for domain: 1x38A01

Molscript image for 1x38A01
1x38A01
PDB coordinates for domain 1x38A01

PDB 1x38, Chain A, Domain 1

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.20 Alpha-Beta Barrel
3.20.20 TIM Barrel
3.20.20.300 Gene3D
3.20.20.300.1
3.20.20.300.1.1
3.20.20.300.1.1.1
3.20.20.300.1.1.1.1
3.20.20.300.1.1.1.1.1

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Segment boundaries for domain 1x38A01

Chopping figure for domain 1x38A01
DomainStart PDB ResidueStop PDB Residue
1x38A01 1 373
1x38A02 374 602

Structural Neighbourhood (1 entries)

There are 1 matching structural neighberhood comparisons for CATH ID 3.20.20.300.1.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 1 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
2oxnA00 79.89 Amino sugar and nucleotide sugar metabolismMetabolic pathwaysBeta-N-acetylhexosaminidase [EC:3.2.1.52]Vibrio choleraeBeta-hexosaminidase 3.20.20.300 333 13 78 3.17 4.05
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Displaying entries 1 to 1 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1x38A01
DYVLYKDATKPVEDRVADLLGRMTLAEKIGQMTQIERLVATPDVLRDNFIGSLLSGGGSVPRKGATAKEWQDMVDGFQKA
CMSTRLGIPMIYGIDAVHGQNNVYGATIFPHNVGLGATRDPYLVKRIGEATALEVRATGIQYAFAPCIAVCRDPRWGRCY
ESYSEDRRIVQSMTELIPGLQGDVPKDFTSGMPFVAGKNKVAACAKHFVGDGGTVDGINENNTIINREGLMNIHMPAYKN
AMDKGVSTVMISYSSWNGVKMHANQDLVTGYLKDTLKFKGFVISDWEGIDRITTPAGSDYSYSVKASILAGLDMIMVPNK
YQQFISILTGHVNGGVIPMSRIDDAVTRILRVKFTMGLFENPYADPAMAEQLG
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1x38A01
DYVLYKDATKPVEDRVADLLGRMTLAEKIGQMTQIERLVATPDVLRDNFIGSLLSGGGSVPRKGATAKEWQDMVDGFQKA
CMSTRLGIPMIYGIDAVHGQNNVYGATIFPHNVGLGATRDPYLVKRIGEATALEVRATGIQYAFAPCIAVCRDPRWGRCY
ESYSEDRRIVQSMTELIPGLQGDVPKDFTSGMPFVAGKNKVAACAKHFVGDGGTVDGINENNTIINREGLMNIHMPAYKN
AMDKGVSTVMISYSSWNGVKMHANQDLVTGYLKDTLKFKGFVISDWEGIDRITTPAGSDYSYSVKASILAGLDMIMVPNK
YQQFISILTGHVNGGVIPMSRIDDAVTRILRVKFTMGLFENPYADPAMAEQLG
BLAST against CATH

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Domain History Events (5)

Domain assigned by auto on 28 Apr 2006 21:16

Assigning to "3.20.20.300" based on similarity with "1iewA01" (NWSI: 100, NWO: 100, SPS: 98.13, SPO: 100, RMSD: 0.17)

Flow stage update by auto on 28 Apr 2006 17:51

NW result present for Domain "1x38A01"

Flow stage update by auto on 28 Apr 2006 17:48

All required files are present for Domain "1x38A01"

Flow stage update by auto on 27 Apr 2006 17:32

Beginning processing for Domain "1x38A01"

Insertion by auto on 15 Mar 2006 01:38

Final ChopClose added based on similarity with "1lq2A" [LEE: 0, LME: 0, MR: 0, LG: 0, SS: 96.59, SI: 100, SO: 100]