CATH Domain: 1wzlA04 XML data for domain: 1wzlA04

Molscript image for 1wzlA04
1wzlA04
PDB coordinates for domain 1wzlA04

PDB 1wzl, Chain A, Domain 4

CATH CodeLevel DescriptionLinks
2 Mainly Beta
2.60 Sandwich
2.60.40 Immunoglobulin-like
2.60.40.1180 Golgi alpha-mannosidase II Gene3D
2.60.40.1180.20
2.60.40.1180.20.1
2.60.40.1180.20.1.1
2.60.40.1180.20.1.1.1
2.60.40.1180.20.1.1.1.1

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Segment boundaries for domain 1wzlA04

Chopping figure for domain 1wzlA04
DomainStart PDB ResidueStop PDB Residue
1wzlA01 1 121
1wzlA02 122 242
1wzlA02 298 502
1wzlA03 243 297
1wzlA04 503 585

Structural Neighbourhood (11 entries)

There are 11 matching structural neighberhood comparisons for CATH ID 2.60.40.1180.20.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 11 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1ea9C04 86.83 Bacillus sp.Cyclomaltodextrinase 2.60.40.1180 81 20 97 1.72 1.76
1uokA03 85.97 Bacillus cereusOligo-1,6-glucosidase 2.60.40.1180 78 19 89 2.17 2.43
1ua7A02 85.59 Starch and sucrose metabolismBacillus subtilisAlpha-amylaseAlpha-amylase [EC:3.2.1.1]Metabolic pathways 2.60.40.1180 78 10 92 2.52 2.72
1iv8A05 83.18 Sulfolobus acidocaldariusGlycosyltrehalose-producing enzyme 2.60.40.1180 66 21 79 1.99 2.50
1m7xA03 83.07 Starch and sucrose metabolismMetabolic pathways1,4-alpha-glucan branching enzyme [EC:2.4.1.18]Glycogen biosynthetic process1,4-alpha-glucan-branching enzyme 2.60.40.1180 106 20 76 2.27 2.97
1gjwA02 82.28 Thermotoga maritimaMaltodextrin glycosyltransferase 2.60.40.1180 68 11 75 2.53 3.33
1lwjA03 81.94 4-alpha-glucanotransferase [EC:2.4.1.25]Thermotoga maritimaStarch and sucrose metabolism4-alpha-glucanotransferaseMetabolic pathways 2.60.40.1180 50 12 60 1.26 2.09
1eh9A02 79.86 Sulfolobus solfataricusMalto-oligosyltrehalose trehalohydrolase 2.60.40.1180 62 6 68 2.52 3.67
1bf2A03 79.19 Pseudomonas amyloderamosaIsoamylase 2.60.40.1180 114 10 69 2.94 4.24
1ht6A02 78.20 Alpha-amylase type A isozymeHordeum vulgare 2.60.40.1180 57 10 62 2.75 4.39
1kwgA03 76.91 Beta-galactosidaseThermus thermophilus 2.60.40.1180 50 14 60 2.83 4.70
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Displaying entries 1 to 11 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1wzlA04
GNVRSWHADKQANLYAFVRTVQDQHVGVVLNNRGEKQTVLLQVPESGGKTWLDCLTGEEVHGKQGQLKLTLRPYQGMILW
NGR
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1wzlA04
GNVRSWHADKQANLYAFVRTVQDQHVGVVLNNRGEKQTVLLQVPESGGKTWLDCLTGEEVHGKQGQLKLTLRPYQGMILW
NGR
BLAST against CATH

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Domain History Events (6)

Domain assigned by auto on 07 Aug 2007 06:39

Assigning to "2.60.40.1180" based on similarity with "1bvzA04"

Flow stage update by auto on 07 Aug 2007 06:31

No in_process hits for Domain "1wzlA04" ready to be processed

Flow stage update by auto on 07 Aug 2007 06:31

NW result present for Domain "1wzlA04"

Flow stage update by auto on 21 Jul 2007 23:04

All required files are present for Domain "1wzlA04"

Flow stage update by auto on 20 Jul 2007 10:57

Beginning processing for Domain "1wzlA04"

Insertion by auto on 20 Jul 2007 10:07

Final ChopClose added based on similarity with "1bvzA"