CATH Domain: 1wy0A00 XML data for domain: 1wy0A00

Molscript image for 1wy0A00
1wy0A00
PDB coordinates for domain 1wy0A00

PDB 1wy0, Chain A, Domain 0

CATH CodeLevel DescriptionLinks
1 Mainly Alpha
1.10 Orthogonal Bundle
1.10.600 Farnesyl Diphosphate Synthase
1.10.600.10 Farnesyl Diphosphate Synthase Gene3D
1.10.600.10.5
1.10.600.10.5.1
1.10.600.10.5.1.1
1.10.600.10.5.1.1.1
1.10.600.10.5.1.1.1.1

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Segment boundaries for domain 1wy0A00

Chopping figure for domain 1wy0A00
DomainStart PDB ResidueStop PDB Residue
1wy0A00 2 341

Structural Neighbourhood (1 entries)

There are 1 matching structural neighberhood comparisons for CATH ID 1.10.600.10.5.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 1 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1v4eA00 83.51 Terpenoid backbone biosynthesisThermotoga maritimaOctaprenyl-diphosphate synthase [EC:2.5.1.-]Octoprenyl-diphosphate synthase, putative 1.10.600.10 280 22 85 4.03 4.72
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Displaying entries 1 to 1 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1wy0A00
EKYEELFARIKEKAKLIDEKIFELIPEKDPRVLYEAARHYPLAGGKRVRPFVVLTSTEAVGGDPLRAIYPAVAIELIHNY
SLVHDDIMDMDETRRGKPTVHRIWGVNMAILAGDLLFSKAFEAVARAEIPPEKKARVLEVIVKASNELCEGQARDLEFEK
KSTVTIEEYMEMISGKTGALFEASAKVGGIIGTDNEEYIKALSSWGRNVGIAFQIWDDVLDLIADEKKLGKPVGSDIRKG
KKTLIVAHFFENADEKDKQRFLKIFGKDIKSDVMEAIDLLKKYGSIDYAAEIAKDMIKKANEALRILPKSKARMDLELLA
KFIVERE
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1wy0A00
MEKYEELFARIKEKAKLIDEKIFELIPEKDPRVLYEAARHYPLAGGKRVRPFVVLTSTEAVGGDPLRAIYPAVAIELIHN
YSLVHDDIMDMDETRRGKPTVHRIWGVNMAILAGDLLFSKAFEAVARAEIPPEKKARVLEVIVKASNELCEGQARDLEFE
KKSTVTIEEYMEMISGKTGALFEASAKVGGIIGTDNEEYIKALSSWGRNVGIAFQIWDDVLDLIADEKKLGKPVGSDIRK
GKKTLIVAHFFENADEKDKQRFLKIFGKYAGDVKGRGIIEEDIKSDVMEAIDLLKKYGSIDYAAEIAKDMIKKANEALRI
LPKSKARMDLELLAKFIVEREY
BLAST against CATH

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Domain History Events (6)

Domain assigned by auto on 27 Jun 2007 22:11

Assigning to "1.10.600.10" based on similarity with "2h8oA00"

Flow stage update by auto on 25 Jun 2007 18:02

No in_process hits for Domain "1wy0A00" ready to be processed

Flow stage update by auto on 25 Jun 2007 18:02

NW result present for Domain "1wy0A00"

Flow stage update by auto on 25 Jun 2007 18:02

All required files are present for Domain "1wy0A00"

Flow stage update by auto on 25 Jun 2007 18:02

Beginning processing for Domain "1wy0A00"

Insertion by cuff on 30 May 2007 14:43

validated chopping