CATH Domain: 1wuiL00 XML data for domain: 1wuiL00

Molscript image for 1wuiL00
1wuiL00
PDB coordinates for domain 1wuiL00

PDB 1wui, Chain L, Domain 0

CATH CodeLevel DescriptionLinks
1 Mainly Alpha
1.10 Orthogonal Bundle
1.10.645 Cytochrome-c3 Hydrogenase; chain B
1.10.645.10 Cytochrome-c3 Hydrogenase, chain B Gene3D
1.10.645.10.1
1.10.645.10.1.1
1.10.645.10.1.1.1
1.10.645.10.1.1.1.1
1.10.645.10.1.1.1.1.1

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Segment boundaries for domain 1wuiL00

Chopping figure for domain 1wuiL00
DomainStart PDB ResidueStop PDB Residue
1wuiL00 19 552

Structural Neighbourhood (1 entries)

There are 1 matching structural neighberhood comparisons for CATH ID 1.10.645.10.1.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 1 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
2wpnB00 88.45 Ferredoxin hydrogenase [EC:1.12.7.2]Desulfovibrio vulgaris str. HildenboroughMethane metabolismPeriplasmic [NiFeSe] hydrogenase, large subunit, selenocysteine-containingGlyoxylate and dicarboxylate metabolism 1.10.645.10 479 37 87 1.70 1.94
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Displaying entries 1 to 1 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1wuiL00
SSYSGPIVVDPVTRIEGHLRIEVEVENGKVKNAYSSSTLFRGLEIILKGRDPRDAQHFTQRTCGVTYTHALASTRCVDNA
VGVHIPKNATYIRNLVLGAQYLHDHIVHFYHLHALDFVDVTAALKADPAKAAKVASSISPRKTTAADLKAVQDKLKTFVE
TGQLGPFTNAYFLGGHPAYYLDPETNLIATAHYLEALRLQVKAARAMAVFGAKNPHTQFTVVGGVTCYDALTPQRIAEFE
ALWKETKAFVDEVYIPDLLVVAAAYKDWTQYGGTDNFITFGEFPKDEYDLNSRFFKPGVVFKRDFKNIKPFDKMQIEEHV
RHSWYEGAEARHPWKGQTQPKYTDLHGDDRYSWMKAPRYMGEPMETGPLAQVLIAYSQGHPKVKAVTDAVLAKLGVGPEA
LFSTLGRTAARGIETAVIAEYVGVMLQEYKDNIAKGDNVICAPWEMPKQAEGVGFVNAPRGGLSHWIRIEDGKIGNFQLV
VPSTWTLGPRCDKNKLSPVEASLIGTPVADAKRPVEILRTVHSFDPIACGVH
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1wuiL00
SSYSGPIVVDPVTRIEGHLRIEVEVENGKVKNAYSSSTLFRGLEIILKGRDPRDAQHFTQRTCGVXTYTHALASTRCVDN
AVGVHIPKNATYIRNLVLGAQYLHDHIVHFYHLHALDFVDVTAALKADPAKAAKVASSISPRKTTAADLKAVQDKLKTFV
ETGQLGPFTNAYFLGGHPAYYLDPETNLIATAHYLEALRLQVKAARAMAVFGAKNPHTQFTVVGGVTCYDALTPQRIAEF
EALWKETKAFVDEVYIPDLLVVAAAYKDWTQYGGTDNFITFGEFPKDEYDLNSRFFKPGVVFKRDFKNIKPFDKMQIEEH
VRHSWYEGAEARHPWKGQTQPKYTDLHGDDRYSWMKAPRYMGEPMETGPLAQVLIAYSQGHPKVKAVTDAVLAKLGVGPE
ALFSTLGRTAARGIETAVIAEYVGVMLQEYKDNIAKGDNVICAPWEMPKQAEGVGFVNAPRGGLSHWIRIEDGKIGNFQL
VVPSTWTLGPRCDKNKLSPVEASLIGTPVADAKRPVEILRTVHSFDPXIACGVH
BLAST against CATH

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Domain History Events (5)

Domain assigned by auto on 28 Apr 2006 20:30

Assigning to "1.10.645.10" based on similarity with "1ublL00" (NWSI: 99.625468164794, NWO: 100, SPS: 99.15, SPO: 99, RMSD: 0.13)

Flow stage update by auto on 28 Apr 2006 17:50

NW result present for Domain "1wuiL00"

Flow stage update by auto on 28 Apr 2006 17:47

All required files are present for Domain "1wuiL00"

Flow stage update by auto on 27 Apr 2006 17:32

Beginning processing for Domain "1wuiL00"

Insertion by auto on 09 Mar 2006 22:28

Final ChopClose added based on similarity with "1ubhL" [LEE: 0, LME: 0, MR: 0, LG: 1, SS: 99.02, SI: 99.625468164794, SO: 100]