CATH Domain: 1wrjA02 XML data for domain: 1wrjA02

Molscript image for 1wrjA02
1wrjA02
PDB coordinates for domain 1wrjA02

PDB 1wrj, Chain A, Domain 2

CATH CodeLevel DescriptionLinks
1 Mainly Alpha
1.10 Orthogonal Bundle
1.10.10 Arc Repressor Mutant, subunit A
1.10.10.10 "winged helix" repressor DNA binding domain Gene3D
1.10.10.10.16
1.10.10.10.16.1
1.10.10.10.16.1.1
1.10.10.10.16.1.1.1
1.10.10.10.16.1.1.1.1

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Segment boundaries for domain 1wrjA02

Chopping figure for domain 1wrjA02
DomainStart PDB ResidueStop PDB Residue
1wrjA01 1 67
1wrjA02 68 150

Structural Neighbourhood (11 entries)

There are 11 matching structural neighberhood comparisons for CATH ID 1.10.10.10.16.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 11 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1z05A01 80.95 Vibrio choleraeTranscriptional regulator, ROK family 1.10.10.10 72 6 72 3.52 4.87
1d3yA01 80.29 DNA topoisomerase VI subunit A [EC:5.99.1.3]Methanocaldococcus jannaschiiType II DNA topoisomerase VI subunit A 1.10.10.10 71 7 69 3.37 4.82
2w25A01 79.56 Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory proteinLeucine-responsive regulatory proteinMycobacterium tuberculosis 1.10.10.10 52 11 60 2.74 4.55
2a6hF02 78.13 Thermus thermophilus HB8RNA polymerase sigma factorRNA polymerase primary sigma factor 1.10.10.10 54 14 56 2.73 4.82
3ccyA01 76.62 Bordetella parapertussisPutative TetR-family transcriptional regulator 1.10.10.60 44 9 50 2.20 4.35
2hyjA01 76.59 Streptomyces coelicolorPutative tetR-family transcriptional regulator 1.10.10.60 46 15 50 2.43 4.80
2ibdA01 76.35 Rhodococcus jostii RHA1Possible transcriptional regulator 1.10.10.60 45 11 50 2.48 4.90
1sauA02 75.86 Archaeoglobus fulgidusSulfite reductase, desulfoviridin-type subunit gamma (DsvC) 1.10.10.370 70 7 68 3.32 4.83
2raeA01 75.31 Rhodococcus jostii RHA1Transcriptional regulator, AcrR family protein 1.10.10.60 43 11 48 1.89 3.92
1hsjA03 74.61 Staphylococcus aureus subsp. aureus NCTC 8325HTH-type transcriptional regulator sarR 1.10.10.10 82 9 59 2.70 4.57
2f2eA01 72.92 Pseudomonas aeruginosaPutative uncharacterized protein 1.10.10.10 89 2 57 2.78 4.85
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Displaying entries 1 to 11 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1wrjA02
PFNEFRIRVFKEVMRIKWGEVRTYKQVADAVKTSPRAVGTALSKNNVLLIIPCHRVIGEKSLGGYSRGVELKRKLLELEG
IDV
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1wrjA02
PFNEFRIRVFKEVMRIKWGEVRTYKQVADAVKTSPRAVGTALSKNNVLLIIPCHRVIGEKSLGGYSRGVELKRKLLELEG
IDVAKFIEK
BLAST against CATH

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Domain History Events (6)

Domain assigned by auto on 26 Apr 2009 07:01

Assigning to "1.10.10.10" based on similarity with "1mgtA02"

Flow stage update by auto on 26 Apr 2009 05:54

No in_process hits for Domain "1wrjA02" ready to be processed

Flow stage update by auto on 26 Apr 2009 05:54

NW result present for Domain "1wrjA02"

Flow stage update by auto on 25 Apr 2009 08:08

All required files are present for Domain "1wrjA02"

Flow stage update by auto on 24 Apr 2009 02:31

Beginning processing for Domain "1wrjA02"

Insertion by cuff on 23 Apr 2009 16:40

nice chopping