CATH Domain: 1wriA00 XML data for domain: 1wriA00

Molscript image for 1wriA00
1wriA00
PDB coordinates for domain 1wriA00

PDB 1wri, Chain A, Domain 0

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.10 Roll
3.10.20 Ubiquitin-like (UB roll)
3.10.20.30 Gene3D
3.10.20.30.1
3.10.20.30.1.1
3.10.20.30.1.1.1
3.10.20.30.1.1.1.1
3.10.20.30.1.1.1.1.1

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Segment boundaries for domain 1wriA00

Chopping figure for domain 1wriA00
DomainStart PDB ResidueStop PDB Residue
1wriA00 1 93

Structural Neighbourhood (29 entries)

There are 29 matching structural neighberhood comparisons for CATH ID 3.10.20.30.1.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 29 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1krhA01 88.91 Benzoate 1,2-dioxygenase electron transfer componentAcinetobacter sp. ADP1 3.10.20.30 103 31 90 3.70 4.10
2piaA03 86.69 Burkholderia cepaciaPhthalate dioxygenase reductase 3.10.20.30 96 18 86 2.00 2.31
1doiA00 84.87 Ferredoxin-1Haloarcula marismortui 3.10.20.30 128 27 71 1.61 2.24
1l5pA00 84.28 FerredoxinTrichomonas vaginalis 3.10.20.30 93 22 90 2.93 3.24
1i7hC00 83.64 2Fe-2S ferredoxinFerredoxin, 2Fe-2SProtein bindingEscherichia coli K-12 3.10.20.30 108 20 84 3.13 3.71
1xlqA00 82.79 PutidaredoxinPseudomonas putida 3.10.20.30 106 19 85 3.70 4.31
2bt6B00 80.97 Bos taurusProtein homodimerization activitySteroid biosynthetic processProtein C-terminus bindingAdrenodoxin, mitochondrial 3.10.20.30 104 17 84 3.77 4.46
1jq4A00 79.67 Methane monooxygenase component CMethane metabolismMethylococcus capsulatusMethane monooxygenase [EC:1.14.13.25]Metabolic pathways 3.10.20.30 98 25 91 3.41 3.71
1vlbA01 79.33 Desulfovibrio gigasAldehyde oxidoreductase 3.10.20.30 74 16 70 2.91 4.10
1wx9A00 78.27 Large proline-rich protein BAT3Homo sapiensProtein binding 3.10.20.90 86 11 72 3.40 4.72
1n62A01 78.05 Oligotropha carboxidovorans OM5Carbon monoxide dehydrogenase small chain 3.10.20.30 77 18 73 3.32 4.54
1h4rA01 77.98 Negative regulation of cell-cell adhesionSchwann cell proliferationCytoskeletonNucleolusEarly endosome 3.10.20.90 78 12 69 2.84 4.06
2h88B01 77.76 Citrate cycle (TCA cycle)Oxidative phosphorylationSuccinate dehydrogenase (ubiquinone) iron-sulfur protein [EC:1.3.5.1]Gallus gallusMetabolic pathways 3.10.20.30 107 17 70 3.45 4.92
2bs2B01 77.66 Benzoate degradation via CoA ligationButanoate metabolismOxidative phosphorylationTwo-component systemCitrate cycle (TCA cycle) 3.10.20.30 106 11 70 3.08 4.35
2he7A01 77.57 Tight junctionErythrocyte membrane protein band 4.1Homo sapiensBand 4.1-like protein 3Cell-cell junction 3.10.20.90 80 16 74 3.38 4.56
1vjkA00 77.49 Pyrococcus furiosusMolybdenum cofactor biosynthesis protein DMolybdopterin converting factor, subunit 1 3.10.20.30 87 11 77 3.48 4.50
2kfjA00 77.24 Cell division control protein 24MAPK signaling pathway - yeastMating projection tipInvasive growth in response to glucose limitationCell division control protein 24 3.10.20.240 86 10 64 3.20 4.96
1yqbA01 76.63 Ubiquilin-3Homo sapiensUbiquilin 3.10.20.90 71 14 67 2.84 4.19
1h8cA00 76.18 Cytoplasmic sequestering of NF-kappaBHeat shock protein bindingFAS-associated factor 1CytosolPositive regulation of protein complex assembly 3.10.20.90 82 6 69 3.23 4.62
1v8cA01 76.15 Threonine synthaseThermus thermophilus 3.10.20.30 85 2 75 3.47 4.61
1z2mA02 76.06 RIG-I-like receptor signaling pathwayInterferon-induced 17 kDa proteinISG15-protein conjugationHomo sapiensUbiquitin cross-reactive protein 3.10.20.90 77 5 69 3.42 4.89
1ryjA00 75.83 Methanothermobacter thermautotrophicus str. Delta HPutative uncharacterized protein 3.10.20.30 70 20 70 3.45 4.86
1wh3A01 75.52 CytoplasmDNA binding59 kDa 2'-5'-oligoadenylate synthase-like proteinThyroid hormone receptor bindingNucleolus 3.10.20.90 71 14 67 3.36 4.96
1z2mA01 75.36 RIG-I-like receptor signaling pathwayInterferon-induced 17 kDa proteinISG15-protein conjugationHomo sapiensUbiquitin cross-reactive protein 3.10.20.90 75 5 72 3.59 4.98
1uh6A00 75.12 Mus musculusUbiquitin-like protein 5Ubiquitin-like protein 5 3.10.20.90 100 4 64 2.90 4.53
1j8cA00 74.94 CytoplasmPlasma membraneHomo sapiensUbiquilinUbiquilin-2 3.10.20.90 103 8 61 2.59 4.23
3a4rA00 74.91 Mus musculusNFATC2-interacting proteinRegulation of transcription, DNA-dependentCytokine production 3.10.20.90 79 10 66 3.12 4.68
2kd0A01 74.52 LRR repeats and ubiquitin-like domain-containing protein At2g30105Arabidopsis thaliana 3.10.20.90 71 15 67 2.92 4.31
1tkeA01 73.25 Aminoacyl-tRNA biosynthesisThreonyl-tRNA synthetaseZinc ion bindingThreonyl-tRNA synthetase [EC:6.1.1.3]RNA binding 3.10.20.30 64 10 68 3.09 4.49
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Displaying entries 1 to 29 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1wriA00
AYKVTLKTPDGDITFDVEPGERLIDIGSEKADLPLSCQAGACSTCLGKIVSGTVDQSEGSFLDDEQIEQGYVLTCIAIPE
SDVVIETHKEDEL
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1wriA00
AYKVTLKTPDGDITFDVEPGERLIDIGSEKADLPLSCQAGACSTCLGKIVSGTVDQSEGSFLDDEQIEQGYVLTCIAIPE
SDVVIETHKEDEL
BLAST against CATH

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Domain History Events (3)

Insertion by sillitoe on 06 Mar 2006 15:40

HomCheck 'Assigned H' domains

Flow stage update by sillitoe on 06 Mar 2006 15:40

HomCheck 'Assigned H' domains

Insertion by auto on 06 Mar 2006 00:16

Cut based on decision in database "DomChop" on "cathdb"