CATH Domain: 1wpwA00 XML data for domain: 1wpwA00

Molscript image for 1wpwA00
1wpwA00
PDB coordinates for domain 1wpwA00

PDB 1wpw, Chain A, Domain 0

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.40 3-Layer(aba) Sandwich
3.40.718 Isopropylmalate Dehydrogenase
3.40.718.10 Isopropylmalate Dehydrogenase Gene3D
3.40.718.10.1
3.40.718.10.1.4
3.40.718.10.1.4.1
3.40.718.10.1.4.1.1
3.40.718.10.1.4.1.1.1

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Segment boundaries for domain 1wpwA00

Chopping figure for domain 1wpwA00
DomainStart PDB ResidueStop PDB Residue
1wpwA00 1 336

Structural Neighbourhood (4 entries)

There are 4 matching structural neighberhood comparisons for CATH ID 3.40.718.10.1.4.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 4 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1hqsA00 86.28 Bacillus subtilisIsocitrate dehydrogenase [NADP]Citrate cycle (TCA cycle)Isocitrate dehydrogenase [EC:1.1.1.42]Glutathione metabolism 3.40.718.10 422 34 82 2.02 2.46
1cnzA00 86.06 Metabolic pathwaysValine, leucine and isoleucine biosynthesisSalmonella enterica subsp. enterica serovar Typhimurium3-isopropylmalate dehydrogenase3-isopropylmalate dehydrogenase [EC:1.1.1.85] 3.40.718.10 363 31 88 2.75 3.12
1w0dA00 85.88 Metabolic pathwaysValine, leucine and isoleucine biosynthesis3-isopropylmalate dehydrogenase3-isopropylmalate dehydrogenase [EC:1.1.1.85]Mycobacterium tuberculosis 3.40.718.10 337 31 84 2.51 2.96
2uxqB00 81.85 Desulfotalea psychrophilaCitrate cycle (TCA cycle)Isocitrate dehydrogenase (NAD+) [EC:1.1.1.41]Metabolic pathwaysProbable isocitrate dehydrogenase 3.40.718.10 401 17 85 3.30 3.88
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Displaying entries 1 to 4 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1wpwA00
GFTVALIQGDGIGPEIVSKSKRILAKINELYSLPIEYIEVEAGDRALARYGEALPKDSLKIIDKADIILKGPVGESAADV
VVKLRQIYDMYANIRPAKSIPGIDTKYGNVDILIVRENTEDLYKGFEHIVSDGVAVGMKIITRFASERIAKVGLNFALRR
RKKVTCVHKANVMRITDGLFAEACRSVLKGKVEYSEMYVDAAAANLVRNPQMFDVIVTENVYGDILSDEASQIAGSLGIA
PSANIGDKKALFEPVHGAAFDIAGKNIGNPTAFLLSVSMMYERMYELSNDDRYIKASRALENAIYLVYKERKALTPDVGG
NATTDDLINEIYNKLG
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1wpwA00
GFTVALIQGDGIGPEIVSKSKRILAKINELYSLPIEYIEVEAGDRALARYGEALPKDSLKIIDKADIILKGPVGESAADV
VVKLRQIYDMYANIRPAKSIPGIDTKYGNVDILIVRENTEDLYKGFEHIVSDGVAVGMKIITRFASERIAKVGLNFALRR
RKKVTCVHKANVMRITDGLFAEACRSVLKGKVEYSEMYVDAAAANLVRNPQMFDVIVTENVYGDILSDEASQIAGSLGIA
PSANIGDKKALFEPVHGAAFDIAGKNIGNPTAFLLSVSMMYERMYELSNDDRYIKASRALENAIYLVYKERKALTPDVGG
NATTDDLINEIYNKLG
BLAST against CATH

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Domain History Events (6)

Domain assigned by auto on 20 Jul 2007 16:12

Assigning to "3.40.718.10" based on similarity with "1gc8A00"

Flow stage update by auto on 19 Jul 2007 22:49

No in_process hits for Domain "1wpwA00" ready to be processed

Flow stage update by auto on 19 Jul 2007 22:49

NW result present for Domain "1wpwA00"

Flow stage update by auto on 16 Jul 2007 22:37

All required files are present for Domain "1wpwA00"

Flow stage update by auto on 14 Jul 2007 06:01

Beginning processing for Domain "1wpwA00"

Insertion by auto on 14 Jul 2007 04:22

Final ChopClose added based on similarity with "1wpwB"