CATH Domain: 1wkqB00 XML data for domain: 1wkqB00

Molscript image for 1wkqB00
1wkqB00
PDB coordinates for domain 1wkqB00

PDB 1wkq, Chain B, Domain 0

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.40 3-Layer(aba) Sandwich
3.40.140 Cytidine Deaminase; domain 2
3.40.140.10 Cytidine Deaminase, domain 2 Gene3D
3.40.140.10.3
3.40.140.10.3.1
3.40.140.10.3.1.1
3.40.140.10.3.1.1.1
3.40.140.10.3.1.1.1.1

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Segment boundaries for domain 1wkqB00

Chopping figure for domain 1wkqB00
DomainStart PDB ResidueStop PDB Residue
1wkqB00 2 156

Structural Neighbourhood (0 entries)

Sorry, we could not find any non-redundant representatives with similar structural scores to this domain in CATH.


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Domain ATOM Sequence 

>pdb|1wkqB00
NHETFLKRAVTLACEGVNAGIGGPFGAVIVKDGAIIAEGQNNVTTSNDPTAHAEVTAIRKACKVLGAYQLDDCILYTSCE
PCPMCLGAIYWARPKAVFYAAEHTDAAEAGFDDSFIYKEIDKPAEERTIPFYQVTLTEHLSPFQAWRNFANKKEY
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1wkqB00
MHHHHHHAMNHETFLKRAVTLACEGVNAGIGGPFGAVIVKDGAIIAEGQNNVTTSNDPTAHAEVTAIRKACKVLGAYQLD
DCILYTSCEPCPMCLGAIYWARPKAVFYAAEHTDAAEAGFDDSFIYKEIDKPAEERTIPFYQVTLTEHLSPFQAWRNFAN
KKEY
BLAST against CATH

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Domain History Events (5)

Domain assigned by auto on 28 Apr 2006 19:25

Assigning to "3.40.140.10" based on similarity with "1tiyA00" (NWSI: 93.9024390243902, NWO: 95.1219512195122, SPS: 95.42, SPO: 99, RMSD: 1.03)

Flow stage update by auto on 28 Apr 2006 17:50

NW result present for Domain "1wkqB00"

Flow stage update by auto on 28 Apr 2006 17:45

All required files are present for Domain "1wkqB00"

Flow stage update by auto on 27 Apr 2006 17:31

Beginning processing for Domain "1wkqB00"

Insertion by auto on 09 Mar 2006 09:08

Final ChopClose added based on similarity with "1wkqA" [LEE: 0, LME: 0, MR: 3, LG: 3, SS: 98.12, SI: 100, SO: 100]