CATH Domain: 1w9pA01 XML data for domain: 1w9pA01

Molscript image for 1w9pA01
1w9pA01
PDB coordinates for domain 1w9pA01

PDB 1w9p, Chain A, Domain 1

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.20 Alpha-Beta Barrel
3.20.20 TIM Barrel
3.20.20.80 Glycosidases Gene3D
3.20.20.80.31
3.20.20.80.31.1
3.20.20.80.31.1.1
3.20.20.80.31.1.1.1
3.20.20.80.31.1.1.1.1

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Segment boundaries for domain 1w9pA01

Chopping figure for domain 1w9pA01
DomainStart PDB ResidueStop PDB Residue
1w9pA01 39 297
1w9pA01 361 433
1w9pA02 298 360

Structural Neighbourhood (4 entries)

There are 4 matching structural neighberhood comparisons for CATH ID 3.20.20.80.31.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 4 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
3fndA01 82.32 ChitinaseBacteroides thetaiotaomicron 3.20.20.80 261 20 77 3.25 4.21
1ta3A00 76.67 Triticum aestivumXylanase inhibitor protein 1 3.20.20.80 274 14 75 3.62 4.81
1eokA00 76.51 Endo-beta-N-acetylglucosaminidase F3Elizabethkingia meningoseptica 3.20.20.80 282 13 70 3.22 4.57
1narA00 75.85 NarboninVicia narbonensis 3.20.20.80 289 12 77 3.34 4.33
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Displaying entries 1 to 4 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1w9pA01
ASSGYRSVVYFVNWAIYGRNHNPQDLPVERLTHVLYAFANVRPETGEVYMTDSWADIEKHYPGDSWSDTGNNVYGCIKQL
YLLKKQNRNLKVLLSIGGWTYSPNFAPAASTDAGRKNFAKTAVKLLQDLGFDGLDIDWEYPENDQQANDFVLLLKEVRTA
LDSYSAANAGGQHFLLTVASPAGPDKIKVLHLKDMDQQLDFWNLMAYDYAGSFSSLSGHQANVYNDTSNPLSTPFNTQTA
LDLYRAGGVPANKIVLGMPDNPQVANLKSGYIKSLGLGGAMWWDSSSDKTGSDSLITTVVNALGGTGVFEQSQNELDYPV
SQYDNLRNGMQT
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1w9pA01
ASSGYRSVVYFVNWAIYGRNHNPQDLPVERLTHVLYAFANVRPETGEVYMTDSWADIEKHYPGDSWSDTGNNVYGCIKQL
YLLKKQNRNLKVLLSIGGWTYSPNFAPAASTDAGRKNFAKTAVKLLQDLGFDGLDIDWEYPENDQQANDFVLLLKEVRTA
LDSYSAANAGGQHFLLTVASPAGPDKIKVLHLKDMDQQLDFWNLMAYDYAGSFSSLSGHQANVYNDTSNPLSTPFNTQTA
LDLYRAGGVPANKIVLGMPDNPQVANLKSGYIKSLGLGGAMWWDSSSDKTGSDSLITTVVNALGGTGVFEQSQNELDYPV
SQYDNLRNGMQT
BLAST against CATH

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Domain History Events (6)

Domain assigned by auto on 04 Nov 2006 21:27

Assigning to "3.20.20.80" based on similarity with "1d2kA01"

Flow stage update by auto on 04 Nov 2006 21:24

No in_process hits for Domain "1w9pA01" ready to be processed

Flow stage update by auto on 04 Nov 2006 21:24

NW result present for Domain "1w9pA01"

Flow stage update by auto on 02 Nov 2006 14:22

All required files are present for Domain "1w9pA01"

Flow stage update by auto on 01 Nov 2006 21:55

Beginning processing for Domain "1w9pA01"

Insertion by auto on 01 Nov 2006 21:20

Final ChopClose added based on similarity with "1wnoA"