CATH Domain: 1w8oA01 XML data for domain: 1w8oA01

Molscript image for 1w8oA01
1w8oA01
PDB coordinates for domain 1w8oA01

PDB 1w8o, Chain A, Domain 1

CATH CodeLevel DescriptionLinks
2 Mainly Beta
2.120 6 Propellor
2.120.10 Neuraminidase
2.120.10.10 Gene3D
2.120.10.10.8
2.120.10.10.8.1
2.120.10.10.8.1.1
2.120.10.10.8.1.1.1
2.120.10.10.8.1.1.1.1

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Segment boundaries for domain 1w8oA01

Chopping figure for domain 1w8oA01
DomainStart PDB ResidueStop PDB Residue
1w8oA01 47 400
1w8oA02 401 502
1w8oA03 503 647

Structural Neighbourhood (1 entries)

There are 1 matching structural neighberhood comparisons for CATH ID 2.120.10.10.8.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 1 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1pjxA00 72.99 Calcium ion bindingDiisopropyl-fluorophosphatase activityLoligo vulgarisDiisopropyl-fluorophosphatase 2.120.10.30 314 9 76 3.60 4.70
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Displaying entries 1 to 1 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1w8oA01
GEPLYTEQDLAVNGREGFPNYRIPALTVTPDGDLLASYDGRPTGIGAPGPNSILQRRSTDGGRTWGEQQVVSAGQTTAPI
KGFSDPSYLVDRETGTIFNFHVYSQRQGFAGSRPGTDPADPNVLHANVATSTDGGLTWSHRTITADITPDPGWRSRFAAS
GEGIQLRYGPHAGRLIQQYTIINAAGAFQAVSVYSDDHGRTWRAGEAVGVGMDENKTVELSDGRVLLNSRDSARSGYRKV
AVSTDGGHSYGPVTIDRDLPDPTNNASIIRAFPDAPAGSARAKVLLFSNAASQTSRSQGTIRMSCDDGQTWPVSKVFQPG
SMSYSTLTALPDGTYGLLYEPGTGIRYANFNLAW
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1w8oA01
GEPLYTEQDLAVNGREGFPNYRIPALTVTPDGDLLASYDGRPTGIGAPGPNSILQRRSTDGGRTWGEQQVVSAGQTTAPI
KGFSDPSYLVDRETGTIFNFHVYSQRQGFAGSRPGTDPADPNVLHANVATSTDGGLTWSHRTITADITPDPGWRSRFAAS
GEGIQLRYGPHAGRLIQQYTIINAAGAFQAVSVYSDDHGRTWRAGEAVGVGMDENKTVELSDGRVLLNSRDSARSGYRKV
AVSTDGGHSYGPVTIDRDLPDPTNNASIIRAFPDAPAGSARAKVLLFSNAASQTSRSQGTIRMSCDDGQTWPVSKVFQPG
SMSYSTLTALPDGTYGLLYEPGTGIRYANFNLAW
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 18:48

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 18:48

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 17:51

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"