CATH Domain: 1w8gA00 XML data for domain: 1w8gA00

Molscript image for 1w8gA00
1w8gA00
PDB coordinates for domain 1w8gA00

PDB 1w8g, Chain A, Domain 0

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.20 Alpha-Beta Barrel
3.20.20 TIM Barrel
3.20.20.10 Alanine racemase Gene3D
3.20.20.10.9
3.20.20.10.9.1
3.20.20.10.9.1.1
3.20.20.10.9.1.1.1
3.20.20.10.9.1.1.1.1

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Segment boundaries for domain 1w8gA00

Chopping figure for domain 1w8gA00
DomainStart PDB ResidueStop PDB Residue
1w8gA00 3 228

Structural Neighbourhood (8 entries)

There are 8 matching structural neighberhood comparisons for CATH ID 3.20.20.10.9.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 8 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
2o0tA02 79.35 Lysine biosynthesisMetabolic pathwaysDiaminopimelate decarboxylase [EC:4.1.1.20]Diaminopimelate decarboxylaseMycobacterium tuberculosis 3.20.20.10 260 12 80 2.96 3.68
1knwA02 76.87 Lysine biosynthesisMetabolic pathwaysDiaminopimelate decarboxylase [EC:4.1.1.20]Diaminopimelate decarboxylaseProtein binding 3.20.20.10 244 12 83 3.50 4.19
2fliC00 76.78 Pentose phosphate pathwayPentose and glucuronate interconversionsMetabolic pathwaysRibulose-phosphate 3-epimerase [EC:5.1.3.1]Streptococcus pyogenes serotype M1 3.20.20.70 219 9 73 3.11 4.21
1tqjC00 76.22 Ribulose-phosphate 3-epimerasePentose phosphate pathwayPentose and glucuronate interconversionsCarbon fixation in photosynthetic organismsRibulose-phosphate 3-epimerase [EC:5.1.3.1] 3.20.20.70 218 9 76 3.52 4.57
2g50A02 75.01 Pyruvate kinase isozymes M1/M2Oryctolagus cuniculus 3.20.20.60 232 8 76 3.63 4.76
1q6oB00 74.82 Ascorbate and aldarate metabolism3-keto-L-gulonate-6-phosphate decarboxylase ulaDMagnesium ion binding3-dehydro-L-gulonate-6-phosphate decarboxylase [EC:4.1.1.85]3-dehydro-L-gulonate-6-phosphate decarboxylase activity 3.20.20.70 215 7 73 3.26 4.44
3ctlA00 74.51 [EC:5.1.3.-]D-allulose-6-phosphate 3-epimeraseAllulose 6-phosphate 3-epimerase activityProtein bindingEscherichia coli K-12 3.20.20.70 219 8 75 3.34 4.41
2chrA02 74.34 Ralstonia eutropha JMP134Chloromuconate cycloisomeraseToluene and xylene degradationMuconate cycloisomerase [EC:5.5.1.1]Benzoate degradation via hydroxylation 3.20.20.120 202 7 73 3.58 4.90
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Displaying entries 1 to 8 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1w8gA00
DIAHNLAQVRDKISAAATRCGRSPEEITLLAVSKTKPASAIAEAIDAGQRQFGENYVQEGVDKIRHFQELGVTGLEWHFI
GPLQSNKSRLVAEHFDWCHTIDRLRIATRLNDQRPAELPPLNVLIQINISDENSKSGIQLAELDELAAAVAELPRLRLRG
LMAIPAPESEYVRQFEVARQMAVAFAGLKTRYPHIDTLSLGMSDDMEAAIAAGSTMVRIGTAIFGA
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1w8gA00
MNDIAHNLAQVRDKISAAATRCGRSPEEITLLAVSKTKPASAIAEAIDAGQRQFGENYVQEGVDKIRHFQELGVTGLEWH
FIGPLQSNKSRLVAEHFDWCHTIDRLRIATRLNDQRPAELPPLNVLIQINISDENSKSGIQLAELDELAAAVAELPRLRL
RGLMAIPAPESEYVRQFEVARQMAVAFAGLKTRYPHIDTLSLGMSDDMEAAIAAGSTMVRIGTAIFGARDYSKK
BLAST against CATH

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Domain History Events (6)

Domain assigned by auto on 20 Jul 2007 16:12

Assigning to "3.20.20.10" based on similarity with "1b54000"

Flow stage update by auto on 19 Jul 2007 19:09

No in_process hits for Domain "1w8gA00" ready to be processed

Flow stage update by auto on 19 Jul 2007 19:09

NW result present for Domain "1w8gA00"

Flow stage update by auto on 14 Jul 2007 06:01

All required files are present for Domain "1w8gA00"

Flow stage update by auto on 13 Jul 2007 18:42

Beginning processing for Domain "1w8gA00"

Insertion by auto on 13 Jul 2007 00:18

Final ChopClose added based on similarity with "1b540"