CATH Domain: 1w85C00 XML data for domain: 1w85C00

Molscript image for 1w85C00
1w85C00
PDB coordinates for domain 1w85C00

PDB 1w85, Chain C, Domain 0

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.40 3-Layer(aba) Sandwich
3.40.50 Rossmann fold
3.40.50.970 Gene3D
3.40.50.970.25
3.40.50.970.25.2
3.40.50.970.25.2.1
3.40.50.970.25.2.1.2
3.40.50.970.25.2.1.2.4

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Segment boundaries for domain 1w85C00

Chopping figure for domain 1w85C00
DomainStart PDB ResidueStop PDB Residue
1w85C00 4 368

Structural Neighbourhood (2 entries)

There are 2 matching structural neighberhood comparisons for CATH ID 3.40.50.970.25.2.1.2.4 (SIMAX score < 5)

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Displaying entries 1 to 2 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1ni4A00 84.82 Citrate cycle (TCA cycle)Pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]Pyruvate metabolismProtein bindingMetabolic pathways 3.40.50.970 350 25 85 2.94 3.43
1qs0A00 84.26 2-oxoisovalerate dehydrogenase subunit alphaProtein bindingPseudomonas putida 3.40.50.970 395 33 79 1.64 2.07
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Displaying entries 1 to 2 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1w85C00
TFQFPFAEQLEKVAEQFPTFQILNEEGEVVNEEAMPELSDEQLKELMRRMVYTRILDQRSISLNRQGRLGFYAPTAGQEA
SQIASHFALEKEDFILPGYRDVPQIIWHGLPLYQAFLFSRGHFHGNQIPEGVNVLPPQIIIGAQYIQAAGVALGLKMRGK
KAVAITYTGDGGTSQGDFYEGINFAGAFKAPAIFVVQNNRFAISTPVEKQTVAKTLAQKAVAAGIPGIQVDGMDPLAVYA
AVKAARERAINGEGPTLIETLCFRYGPHTMSGDDPTRYRSKELENEWAKKDPLVRFRKFLEAKGLWSEEEENNVIEQAKE
EIKEAIKKADETPKQKVTDLISIMFEELPFNLKEQYEIYKEKESK
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1w85C00
GVKTFQFPFAEQLEKVAEQFPTFQILNEEGEVVNEEAMPELSDEQLKELMRRMVYTRILDQRSISLNRQGRLGFYAPTAG
QEASQIASHFALEKEDFILPGYRDVPQIIWHGLPLYQAFLFSRGHFHGNQIPEGVNVLPPQIIIGAQYIQAAGVALGLKM
RGKKAVAITYTGDGGTSQGDFYEGINFAGAFKAPAIFVVQNNRFAISTPVEKQTVAKTLAQKAVAAGIPGIQVDGMDPLA
VYAAVKAARERAINGEGPTLIETLCFRYGPHTMSGDDPTRYRSKELENEWAKKDPLVRFRKFLEAKGLWSEEEENNVIEQ
AKEEIKEAIKKADETPKQKVTDLISIMFEELPFNLKEQYEIYKEKESK
BLAST against CATH

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Domain History Events (6)

Domain assigned by auto on 01 Nov 2006 14:45

Assigning to "3.40.50.970" based on similarity with "1w85A00"

Flow stage update by auto on 17 Oct 2006 10:22

No in_process hits for Domain "1w85C00" ready to be processed

Flow stage update by auto on 17 Oct 2006 10:22

NW result present for Domain "1w85C00"

Flow stage update by auto on 16 Oct 2006 16:34

All required files are present for Domain "1w85C00"

Flow stage update by auto on 16 Oct 2006 07:08

Beginning processing for Domain "1w85C00"

Insertion by auto on 16 Oct 2006 06:28

Final ChopClose added based on similarity with "1w85A"