CATH Domain: 1w85B01 XML data for domain: 1w85B01

Molscript image for 1w85B01
1w85B01
PDB coordinates for domain 1w85B01

PDB 1w85, Chain B, Domain 1

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.40 3-Layer(aba) Sandwich
3.40.50 Rossmann fold
3.40.50.970 Gene3D
3.40.50.970.5
3.40.50.970.5.3
3.40.50.970.5.3.1
3.40.50.970.5.3.1.1
3.40.50.970.5.3.1.1.1

[top]
Segment boundaries for domain 1w85B01

Chopping figure for domain 1w85B01
DomainStart PDB ResidueStop PDB Residue
1w85B01 1 191
1w85B02 192 324

Structural Neighbourhood (7 entries)

There are 7 matching structural neighberhood comparisons for CATH ID 3.40.50.970.5.3.1.1.1 (SIMAX score < 5)

[1]
Displaying entries 1 to 7 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
2ozlB01 91.43 Pyruvate dehydrogenase (acetyl-transferring) activityPyruvate dehydrogenase E1 component, beta subunitPyruvate dehydrogenase E1 component subunit beta, mitochondrial precursorTricarboxylic acid cyclePyruvate metabolism 3.40.50.970 193 33 95 1.20 1.25
1ozhD01 81.21 Acetolactate synthase, catabolicKlebsiella pneumoniae 3.40.50.970 176 10 85 3.80 4.46
1t9bB01 80.84 Branched chain family amino acid biosynthetic processAcetolactate synthase large subunitBiosynthesis of valineFAD bindingAcetolactate synthase catalytic subunit, mitochondrial precursor 3.40.50.970 185 11 87 3.77 4.32
2ez9A01 79.73 Lactobacillus plantarumPyruvate metabolismPyruvate oxidasePyruvate oxidase 3.40.50.970 184 7 89 4.41 4.94
2vk8A01 79.61 Pyruvate decarboxylase activityPyruvate metabolic processAlcohol fermentationC-compound and carbohydrate metabolismRespiration 3.40.50.970 187 10 87 3.85 4.38
1zpdA01 79.16 Pyruvate decarboxylaseGlycolysis / GluconeogenesisZymomonas mobilisPyruvate decarboxylase 3.40.50.970 185 11 85 3.91 4.58
1v5eA03 77.54 Sus scrofaInsulin precursor 3.40.50.970 190 10 80 3.66 4.53
[1]
Displaying entries 1 to 7 (page 1 of 1)


[top]
Domain ATOM Sequence 

>pdb|1w85B01
AQMTMVQAITDALRIELKNDPNVLIFGEDVGVNGGVFRATEGLQAEFGEDRVFDTPLAESGIGGLAIGLALQGFRPVPEI
QFFGFVYEVMDSICGQMARIRYRTGGRYHMPITIRSPFGGGVHTPELHSDSLEGLVAQQPGLKVVIPSTPYDAKGLLISA
IRDNDPVIFLEHLKLYRSFRQEVPEGEYTIP
BLAST against CATH

[top]
Domain COMBS Sequence 

>pdb|1w85B01
AQMTMVQAITDALRIELKNDPNVLIFGEDVGVNGGVFRATEGLQAEFGEDRVFDTPLAESGIGGLAIGLALQGFRPVPEI
QFFGFVYEVMDSICGQMARIRYRTGGRYHMPITIRSPFGGGVHTPELHSDSLEGLVAQQPGLKVVIPSTPYDAKGLLISA
IRDNDPVIFLEHLKLYRSFRQEVPEGEYTIP
BLAST against CATH

[top]
Domain History Events (5)

Domain assigned by auto on 28 Apr 2006 19:57

Assigning to "3.40.50.970" based on similarity with "1umcB01" (NWSI: 53.9267015706806, NWO: 97.4489795918367, SPS: 94.73, SPO: 97, RMSD: 0.79)

Flow stage update by auto on 28 Apr 2006 17:50

NW result present for Domain "1w85B01"

Flow stage update by auto on 28 Apr 2006 17:46

All required files are present for Domain "1w85B01"

Flow stage update by auto on 27 Apr 2006 17:31

Beginning processing for Domain "1w85B01"

Insertion by auto on 06 Mar 2006 00:12

Cut based on decision in database "DomChop" on "cathdb"