CATH Domain: 1w6gA03 XML data for domain: 1w6gA03

Molscript image for 1w6gA03
1w6gA03
PDB coordinates for domain 1w6gA03

PDB 1w6g, Chain A, Domain 3

CATH CodeLevel DescriptionLinks
2 Mainly Beta
2.70 Distorted Sandwich
2.70.98 Beta-galactosidase; Chain A, domain 5
2.70.98.20 Copper amine oxidase, Domain 3 Gene3D
2.70.98.20.1
2.70.98.20.1.1
2.70.98.20.1.1.1
2.70.98.20.1.1.1.1
2.70.98.20.1.1.1.1.1

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Segment boundaries for domain 1w6gA03

Chopping figure for domain 1w6gA03
DomainStart PDB ResidueStop PDB Residue
1w6gA01 9 95
1w6gA02 102 203
1w6gA03 204 627

Structural Neighbourhood (4 entries)

There are 4 matching structural neighberhood comparisons for CATH ID 2.70.98.20.1.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 4 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1oacA03 87.95 Tyrosine metabolismGlycine, serine and threonine metabolismMetabolic pathwaysPhenylalanine metabolismBeta-Alanine metabolism 2.70.98.20 409 30 93 1.69 1.81
1ksiA03 87.95 Pisum sativumPrimary amine oxidase 2.70.98.20 415 26 93 1.52 1.63
3hi7A03 84.60 Diamine oxidase [EC:1.4.3.22]Arginine and proline metabolismAmiloride-sensitive amine oxidase [copper-containing]Homo sapiensPrimary amine oxidase activity 2.70.98.20 405 20 90 2.29 2.52
1w7cA01 81.67 Pichia pastorisLysyl oxidase 2.70.98.20 503 20 81 2.14 2.64
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Displaying entries 1 to 4 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1w6gA03
YTDPELTGPLRTTQKPISITQPEGPSFTVTGGNHIEWEKWSLDVGFDVREGVVLHNIAFRDGDRLRPIINRASIAEMVVP
YGDPSPIRSWQNYFDTGEYLVGQYANSLELGCDCLGDITYLSPVISDAFGNPREIRNGICMHEEDWGILAKHSDLWSGIN
YTRRNRRMVISFFTTIGNDYGFYWYLYLDGTIEFEAKATGVVFTSAFPEGGSDNISQLAPGLGAPFHQHIFSARLDMAID
GFTNRVEEEDVVRQTMGPGNERGNAFSRKRTVLTRESEAVREADARTGRTWIISNPESKNRLNEPVGYKLHAHNQPTLLA
DPGSSIARRAAFATKDLWVTRYADDERYPTGDFVNQHSGGAGLPSYIAQDRDIDGQDIVVWHTFGLTHFPRVEDWPIMPV
DTVGFKLRPEGFFDRSPVLDVPA
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1w6gA03
YTDPELTGPLRTTQKPISITQPEGPSFTVTGGNHIEWEKWSLDVGFDVREGVVLHNIAFRDGDRLRPIINRASIAEMVVP
YGDPSPIRSWQNYFDTGEYLVGQYANSLELGCDCLGDITYLSPVISDAFGNPREIRNGICMHEEDWGILAKHSDLWSGIN
YTRRNRRMVISFFTTIGNXDYGFYWYLYLDGTIEFEAKATGVVFTSAFPEGGSDNISQLAPGLGAPFHQHIFSARLDMAI
DGFTNRVEEEDVVRQTMGPGNERGNAFSRKRTVLTRESEAVREADARTGRTWIISNPESKNRLNEPVGYKLHAHNQPTLL
ADPGSSIARRAAFATKDLWVTRYADDERYPTGDFVNQHSGGAGLPSYIAQDRDIDGQDIVVWHTFGLTHFPRVEDWPIMP
VDTVGFKLRPEGFFDRSPVLDVPA
BLAST against CATH

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Domain History Events (5)

Domain assigned by auto on 28 Apr 2006 19:48

Assigning to "2.70.98.20" based on similarity with "1siiA03" (NWSI: 99.7641509433962, NWO: 100, SPS: 98.87, SPO: 100, RMSD: 0.16)

Flow stage update by auto on 28 Apr 2006 17:50

NW result present for Domain "1w6gA03"

Flow stage update by auto on 28 Apr 2006 17:46

All required files are present for Domain "1w6gA03"

Flow stage update by auto on 27 Apr 2006 17:31

Beginning processing for Domain "1w6gA03"

Insertion by auto on 09 Mar 2006 13:43

Final ChopClose added based on similarity with "1rjoA" [LEE: 0, LME: 0, MR: 0, LG: 0, SS: 98.86, SI: 99.8402555910543, SO: 100]