CATH Domain: 1w23A01 XML data for domain: 1w23A01

Molscript image for 1w23A01
1w23A01
PDB coordinates for domain 1w23A01

PDB 1w23, Chain A, Domain 1

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.40 3-Layer(aba) Sandwich
3.40.640 Aspartate Aminotransferase; domain 2
3.40.640.10 Type I PLP-dependent aspartate aminotransferase-like (Major domain) Gene3D
3.40.640.10.2
3.40.640.10.2.1
3.40.640.10.2.1.1
3.40.640.10.2.1.1.1
3.40.640.10.2.1.1.1.1

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Segment boundaries for domain 1w23A01

Chopping figure for domain 1w23A01
DomainStart PDB ResidueStop PDB Residue
1w23A01 16 257
1w23A02 258 360

Structural Neighbourhood (21 entries)

There are 21 matching structural neighberhood comparisons for CATH ID 3.40.640.10.2.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 21 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
2yrrA02 84.63 Thermus thermophilus HB8Aminotransferase, class V 3.40.640.10 241 15 92 2.37 2.56
1m32A02 83.50 2-aminoethylphosphonate--pyruvate transaminaseSalmonella enterica subsp. enterica serovar Typhimurium2-aminoethylphosphonate-pyruvate transaminase [EC:2.6.1.37]Phosphonate and phosphinate metabolismMetabolic pathways 3.40.640.10 237 17 90 2.42 2.66
1t3iB02 80.14 Cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]Probable cysteine desulfuraseThiamine metabolismSelenoamino acid metabolismMetabolic pathways 3.40.640.10 258 14 84 2.84 3.38
1eluA02 79.10 Synechocystis sp. PCC 6714L-cysteine/cystine lyase C-DES 3.40.640.10 264 10 87 4.03 4.59
1p3wA02 79.09 Thiamine metabolismCysteine desulfurase activitySelenocysteine lyase activityCysteine desulfuraseIron-sulfur cluster assembly 3.40.640.10 247 13 90 3.28 3.63
1xi9A02 77.95 Pyrococcus furiosusAminotransferase [EC:2.6.1.-]Alanine aminotransferase 3.40.640.10 242 9 88 4.28 4.84
1vefA02 77.93 Acetylornithine/acetyl-lysine aminotransferase [EC:2.6.1.11 2.6.1.-]Thermus thermophilus HB27Arginine and proline metabolismAcetylornithine/acetyl-lysine aminotransferaseMetabolic pathways 3.40.640.10 242 7 83 4.10 4.91
1bs0A02 77.39 Biotin metabolismMetabolic pathways8-amino-7-oxononanoate synthase [EC:2.3.1.47]8-amino-7-oxononanoate synthase activityBiotin biosynthetic process 3.40.640.10 228 12 83 4.10 4.91
3ffhB02 77.38 Tyrosine metabolismListeria innocuaHistidinol-phosphate aminotransferase [EC:2.6.1.9]Histidine metabolismMetabolic pathways 3.40.640.10 208 10 77 3.41 4.41
3dydA02 76.95 Tyrosine metabolismL-tyrosine:2-oxoglutarate aminotransferase activityPhenylalanine metabolismMetabolic pathwaysUbiquinone and other terpenoid-quinone biosynthesis 3.40.640.10 244 10 87 4.13 4.73
1svvA01 76.91 Leishmania major strain FriedlinThreonine aldolase [EC:4.1.2.5]Glycine, serine and threonine metabolismMetabolic pathwaysPutative uncharacterized protein 3.40.640.10 242 11 85 4.29 4.99
3dr4C01 76.77 Perosamine synthetasePerosamine synthetaseCaulobacter vibrioides 3.40.640.10 236 5 80 3.67 4.58
1fg7A01 76.69 Tyrosine metabolismHistidine metabolismMetabolic pathwaysPhenylalanine metabolismNovobiocin biosynthesis 3.40.640.10 203 9 75 3.61 4.77
1lc5A02 76.63 Porphyrin and chlorophyll metabolismSalmonella enterica subsp. enterica serovar TyphimuriumThreonine-phosphate decarboxylaseThreonine-phosphate decarboxylase [EC:4.1.1.81] 3.40.640.10 225 9 84 3.65 4.33
1c7nA02 76.37 Treponema denticolaHemolysin 3.40.640.10 225 9 79 3.59 4.50
1gd9A02 75.96 Tyrosine metabolismArginine and proline metabolismAspartate aminotransferase [EC:2.6.1.1]Pyrococcus horikoshiiMetabolic pathways 3.40.640.10 223 12 78 3.77 4.83
1d2fA02 75.85 Nitrogen metabolismSelenoamino acid metabolismSulfur metabolismMetabolic pathwaysCysteine and methionine metabolism 3.40.640.10 243 7 87 3.97 4.53
2ez2A02 75.36 Citrobacter freundiiTyrosine phenol-lyase 3.40.640.10 253 7 84 4.16 4.94
2qmaA03 75.16 Diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76]Vibrio parahaemolyticusGlycine, serine and threonine metabolismDiaminobutyrate-pyruvate transaminase & L-2,4-diaminobutyrate decarboxylaseMetabolic pathways 3.40.640.10 238 8 80 3.53 4.36
3ftbA02 74.93 Tyrosine metabolismHistidinol-phosphate aminotransferase [EC:2.6.1.9]Histidine metabolismPhenylalanine metabolismMetabolic pathways 3.40.640.10 222 9 82 3.38 4.09
3k40A02 74.31 Dopamine biosynthetic process from tyrosineDevelopmental pigmentationGrowthProtein bindingDrosophila melanogaster 3.40.640.10 267 8 74 3.63 4.89
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Displaying entries 1 to 21 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1w23A01
KPALERAQKELLNFNDTQMSVMELSHRSQSYEEVHEQAQNLLRELLQIPNDYQILFLQGGASLQFTMLPMNLLTKGTIGN
YVLTGSWSEKALKEAKLLGETHIAASTKANSYQSIPDFSEFQLNENDAYLHITSNNTIYGTQYQNFPEINHAPLIADMSS
DILSRPLKVNQFGMIYAGAQKNLGPSGVTVVIVKKDLLNTKVEQVPTMLQYATHIKSDSLYNTPPTFSIYMLRNVLDWIK
DL
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1w23A01
KPALERAQKELLNFNDTQMSVMELSHRSQSYEEVHEQAQNLLRELLQIPNDYQILFLQGGASLQFTMLPMNLLTKGTIGN
YVLTGSWSEKALKEAKLLGETHIAASTKANSYQSIPDFSEFQLNENDAYLHITSNNTIYGTQYQNFPEINHAPLIADMSS
DILSRPLKVNQFGMIYAGAQKNLGPSGVTVVIVKKDLLNTKVEQVPTMLQYATHIKSDSLYNTPPTFSIYMLRNVLDWIK
DL
BLAST against CATH

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Domain History Events (6)

Domain assigned by auto on 30 Nov 2006 01:36

Assigning to "3.40.640.10" based on similarity with "1w23B01"

Flow stage update by auto on 30 Nov 2006 01:31

No in_process hits for Domain "1w23A01" ready to be processed

Flow stage update by auto on 30 Nov 2006 01:31

NW result present for Domain "1w23A01"

Flow stage update by auto on 29 Nov 2006 13:24

All required files are present for Domain "1w23A01"

Flow stage update by auto on 28 Nov 2006 18:21

Beginning processing for Domain "1w23A01"

Insertion by auto on 28 Nov 2006 17:39

Final ChopClose added based on similarity with "1w23B"