CATH Domain: 1w0pA02 XML data for domain: 1w0pA02

Molscript image for 1w0pA02
1w0pA02
PDB coordinates for domain 1w0pA02

PDB 1w0p, Chain A, Domain 2

CATH CodeLevel DescriptionLinks
2 Mainly Beta
2.120 6 Propellor
2.120.10 Neuraminidase
2.120.10.10 Gene3D
2.120.10.10.6
2.120.10.10.6.1
2.120.10.10.6.1.1
2.120.10.10.6.1.1.1
2.120.10.10.6.1.1.1.1

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Segment boundaries for domain 1w0pA02

Chopping figure for domain 1w0pA02
DomainStart PDB ResidueStop PDB Residue
1w0pA01 25 81
1w0pA01 94 213
1w0pA02 214 353
1w0pA02 541 777
1w0pA03 354 540

Structural Neighbourhood (3 entries)

There are 3 matching structural neighberhood comparisons for CATH ID 2.120.10.10.6.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 3 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1w8oA01 85.00 Micromonospora viridifaciensSialidase 2.120.10.10 354 21 86 2.32 2.67
1v0eD02 75.68 Enterobacteria phage K1FEndo-N-acetylneuraminidase 2.120.10.10 360 10 82 3.65 4.44
1nscA00 74.79 NeuraminidaseInfluenza B virus (STRAIN B/BEIJING/1/87) 2.120.10.10 390 8 75 3.78 4.98
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Displaying entries 1 to 3 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1w0pA02
QGDVIFRGPDRIPSIVASSVTPGVVTAFAEKRVGGGDPGALSNTNDIITRTSRDGGITWDTELNLTEQINVSDEFDFSDP
RPIYDPSSNTVLVSYARWPTDAAQNGDRIKPWMPNGIFYSVYDVASGNWQAPIDVTDQVKNASVNPGPGHGITLTRQQNI
SGSQNGRLIYPAIVLDRFFLNVMSIYSDDGGSNWQTGSTLPIPFRWKSSSILETLEPSEADMVELQNGDLLLTARLDFNQ
IVNGVNYSPRQQFLSKDGGITWSLLEANNANVFSNISTGTVDASITRFEQSDGSHFLLFTNPQGNPAGTNGRQNLGLWFS
FDEGVTWKGPIQLVNGASAYSDIYQLDSENAIVIVETDNSNMRILRMPITLLKQKLT
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1w0pA02
QGDVIFRGPDRIPSIVASSVTPGVVTAFAEKRVGGGDPGALSNTNDIITRTSRDGGITWDTELNLTEQINVSDEFDFSDP
RPIYDPSSNTVLVSYARWPTDAAQNGDRIKPWMPNGIFYSVYDVASGNWQAPIDVTDQVKNASVNPGPGHGITLTRQQNI
SGSQNGRLIYPAIVLDRFFLNVMSIYSDDGGSNWQTGSTLPIPFRWKSSSILETLEPSEADMVELQNGDLLLTARLDFNQ
IVNGVNYSPRQQFLSKDGGITWSLLEANNANVFSNISTGTVDASITRFEQSDGSHFLLFTNPQGNPAGTNGRQNLGLWFS
FDEGVTWKGPIQLVNGASAYSDIYQLDSENAIVIVETDNSNMRILRMPITLLKQKLTLSQN
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 18:48

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 18:48

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 17:51

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"