CATH Domain: 1w0pA01 XML data for domain: 1w0pA01

Molscript image for 1w0pA01
1w0pA01
PDB coordinates for domain 1w0pA01

PDB 1w0p, Chain A, Domain 1

CATH CodeLevel DescriptionLinks
2 Mainly Beta
2.60 Sandwich
2.60.120 Jelly Rolls
2.60.120.200 Gene3D
2.60.120.200.25
2.60.120.200.25.1
2.60.120.200.25.1.1
2.60.120.200.25.1.1.1
2.60.120.200.25.1.1.1.1

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Segment boundaries for domain 1w0pA01

Chopping figure for domain 1w0pA01
DomainStart PDB ResidueStop PDB Residue
1w0pA01 25 81
1w0pA01 94 213
1w0pA02 214 353
1w0pA02 541 777
1w0pA03 354 540

Structural Neighbourhood (4 entries)

There are 4 matching structural neighberhood comparisons for CATH ID 2.60.120.200.25.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 4 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1g86A00 76.63 Eosinophil lysophospholipaseHomo sapiensMulticellular organismal development 2.60.120.200 141 6 63 3.04 4.76
1d2sA00 76.05 Sex hormone-binding globulinAndrogen bindingHomo sapiens 2.60.120.200 170 9 72 3.42 4.69
1kjlA00 75.96 Galectin-3NucleusPlasma membraneGalectin-3Mitochondrial inner membrane 2.60.120.200 138 6 66 3.28 4.96
2ac1A02 75.92 Galactose metabolismCell wallBeta-fructofuranosidase [EC:3.2.1.26]Metabolic pathwaysBeta-fructofuranosidase activity 2.60.120.560 192 2 68 2.89 4.24
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Displaying entries 1 to 4 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1w0pA01
ALFDYNATGDTEFDSPAKQGWMQDNTNNGSGVLTNADGMPAWLVQGIGGRAQWTYSLWRMTTEMKVLSGGMITNYYANGT
QRVLPIISLDSSGNLVVEFEGQTGRTVLATGTAATEYHKFELVFLPGSNPSASFYFDGKLIRDNIQPTASKQNMIVWGNG
SSNTDGVAAYRDIKFEI
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1w0pA01
ALFDYNATGDTEFDSPAKQGWMQDNTNNGSGVLTNADGMPAWLVQGIGGRAQWTYSLWRMTTEMKVLSGGMITNYYANGT
QRVLPIISLDSSGNLVVEFEGQTGRTVLATGTAATEYHKFELVFLPGSNPSASFYFDGKLIRDNIQPTASKQNMIVWGNG
SSNTDGVAAYRDIKFEI
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 18:45

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 18:45

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 17:51

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"