CATH Domain: 1vyxA00 XML data for domain: 1vyxA00

Molscript image for 1vyxA00
1vyxA00
PDB coordinates for domain 1vyxA00

PDB 1vyx, Chain A, Domain 0

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.30 2-Layer Sandwich
3.30.40 Herpes Virus-1
3.30.40.10 Zinc/RING finger domain, C3HC4 (zinc finger) Gene3D
3.30.40.10.20
3.30.40.10.20.1
3.30.40.10.20.1.1
3.30.40.10.20.1.1.1
3.30.40.10.20.1.1.1.1

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Segment boundaries for domain 1vyxA00

Chopping figure for domain 1vyxA00
DomainStart PDB ResidueStop PDB Residue
1vyxA00 1 60

Structural Neighbourhood (1 entries)

There are 1 matching structural neighberhood comparisons for CATH ID 3.30.40.10.20.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 1 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1z60A00 75.19 Nucleotide excision repairProtein N-terminus bindingG-protein coupled receptor internalizationBasal transcription factorsTranslation factor activity, nucleic acid binding 3.10.370.10 59 13 80 3.85 4.81
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Displaying entries 1 to 1 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1vyxA00
MEDEDVPVCWICNEELGNERFRACGCTGELENVHRSCLSTWLTISRNTACQICGVVYNTR
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1vyxA00
MEDEDVPVCWICNEELGNERFRACGCTGELENVHRSCLSTWLTISRNTACQICGVVYNTR
BLAST against CATH

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Domain History Events (3)

Insertion by sillitoe on 06 Mar 2006 15:40

HomCheck 'Assigned H' domains

Flow stage update by sillitoe on 06 Mar 2006 15:40

HomCheck 'Assigned H' domains

Insertion by auto on 06 Mar 2006 00:10

Cut based on decision in database "DomChop" on "cathdb"