CATH Domain: 1vybA00 XML data for domain: 1vybA00

Molscript image for 1vybA00
1vybA00
PDB coordinates for domain 1vybA00

PDB 1vyb, Chain A, Domain 0

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.60 4-Layer Sandwich
3.60.10 Deoxyribonuclease I; Chain A
3.60.10.10 Gene3D
3.60.10.10.7
3.60.10.10.7.1
3.60.10.10.7.1.1
3.60.10.10.7.1.1.1
3.60.10.10.7.1.1.1.1

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Segment boundaries for domain 1vybA00

Chopping figure for domain 1vybA00
DomainStart PDB ResidueStop PDB Residue
1vybA00 3 238

Structural Neighbourhood (1 entries)

There are 1 matching structural neighberhood comparisons for CATH ID 3.60.10.10.7.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 1 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1wduB00 82.94 Bombyx moriORF2 3.60.10.10 219 15 88 2.48 2.80
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Displaying entries 1 to 1 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1vybA00
GSNSHITILTLNINGLNSAIKRHRLASWIKSQDPSVCCIQETHLTCRDTHRLKIKGWRKIYQANGKQKKAGVAILVSDKT
DFKPTKIKRDKEGHYIMVKGSIQQEELTILNIYAPNTGAPRFIKQVLSDLQRDLDSHTLIMGDFNTPLSTLDRSTRQKVN
KDTQELNSALHQADLIDIYRTLHPKSTEYTFFSAPHHTYSKIDHIVGSKALLSKCKRTEIITNYLSDHSAIKLELR
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1vybA00
MTGSNSHITILTLNINGLNSAIKRHRLASWIKSQDPSVCCIQETHLTCRDTHRLKIKGWRKIYQANGKQKKAGVAILVSD
KTDFKPTKIKRDKEGHYIMVKGSIQQEELTILNIYAPNTGAPRFIKQVLSDLQRDLDSHTLIMGDFNTPLSTLDRSTRQK
VNKDTQELNSALHQADLIDIYRTLHPKSTEYTFFSAPHHTYSKIDHIVGSKALLSKCKRTEIITNYLSDHSAIKLELR
BLAST against CATH

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Domain History Events (3)

Insertion by sillitoe on 06 Mar 2006 15:40

HomCheck 'Assigned H' domains

Flow stage update by sillitoe on 06 Mar 2006 15:40

HomCheck 'Assigned H' domains

Insertion by auto on 06 Mar 2006 00:10

Cut based on decision in database "DomChop" on "cathdb"