CATH Domain: 1vq8N00 XML data for domain: 1vq8N00

Molscript image for 1vq8N00
1vq8N00
PDB coordinates for domain 1vq8N00

PDB 1vq8, Chain N, Domain 0

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.30 2-Layer Sandwich
3.30.420 Nucleotidyltransferase; domain 5
3.30.420.100 Gene3D
3.30.420.100.1
3.30.420.100.1.1
3.30.420.100.1.1.1
3.30.420.100.1.1.1.1
3.30.420.100.1.1.1.1.1

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Segment boundaries for domain 1vq8N00

Chopping figure for domain 1vq8N00
DomainStart PDB ResidueStop PDB Residue
1vq8N00 1 186

Structural Neighbourhood (0 entries)

Sorry, we could not find any non-redundant representatives with similar structural scores to this domain in CATH.


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Domain ATOM Sequence 

>pdb|1vq8N00
ATGPRYKVPMRRRREARTDYHQRLRLLKSGKPRLVARKSNKHVRAQLVTLGPNGDDTLASAHSSDLAEYGWEAPTGNMPS
AYLTGLLAGLRAQEAGVEEAVLDIGLNSPTPGSKVFAIQEGAIDAGLDIPHNDDVLADWQRTRGAHIAEYDEQLEEPLYS
GDFDAADLPEHFDELRETLLDGDIEL
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1vq8N00
MATGPRYKVPMRRRREARTDYHQRLRLLKSGKPRLVARKSNKHVRAQLVTLGPNGDDTLASAHSSDLAEYGWEAPTGNMP
SAYLTGLLAGLRAQEAGVEEAVLDIGLNSPTPGSKVFAIQEGAIDAGLDIPHNDDVLADWQRTRGAHIAEYDEQLEEPLY
SGDFDAADLPEHFDELRETLLDGDIEL
BLAST against CATH

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Domain History Events (5)

Domain assigned by auto on 28 Apr 2006 20:35

Assigning to "3.30.420.100" based on similarity with "1vq6N00" (NWSI: 100, NWO: 100, SPS: 97.41, SPO: 100, RMSD: 0.30)

Flow stage update by auto on 28 Apr 2006 17:50

NW result present for Domain "1vq8N00"

Flow stage update by auto on 28 Apr 2006 17:47

All required files are present for Domain "1vq8N00"

Flow stage update by auto on 27 Apr 2006 17:32

Beginning processing for Domain "1vq8N00"

Insertion by auto on 09 Mar 2006 22:52

Final ChopClose added based on similarity with "1s72N" [LEE: 0, LME: 0, MR: 0, LG: 0, SS: 97.63, SI: 100, SO: 100]