CATH Domain: 1vpdA02 XML data for domain: 1vpdA02

Molscript image for 1vpdA02
1vpdA02
PDB coordinates for domain 1vpdA02

PDB 1vpd, Chain A, Domain 2

CATH CodeLevel DescriptionLinks
1 Mainly Alpha
1.10 Orthogonal Bundle
1.10.1040 N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2
1.10.1040.10 N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 Gene3D
1.10.1040.10.5
1.10.1040.10.5.1
1.10.1040.10.5.1.1
1.10.1040.10.5.1.1.1
1.10.1040.10.5.1.1.1.1

[top]
Segment boundaries for domain 1vpdA02

Chopping figure for domain 1vpdA02
DomainStart PDB ResidueStop PDB Residue
1vpdA01 4 165
1vpdA02 166 296

Structural Neighbourhood (1 entries)

There are 1 matching structural neighberhood comparisons for CATH ID 1.10.1040.10.5.1.1.1.1 (SIMAX score < 5)

[1]
Displaying entries 1 to 1 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
2cvzA02 89.49 Valine, leucine and isoleucine degradationMetabolic pathwaysThermus thermophilus HB83-hydroxyisobutyrate dehydrogenase3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31] 1.10.1040.10 130 26 94 1.74 1.84
[1]
Displaying entries 1 to 1 (page 1 of 1)


[top]
Domain ATOM Sequence 

>pdb|1vpdA02
GAGNVTKLANQVIVALNIAASEALTLATKAGVNPDLVYQAIRGGLAGSTVLDAKAPVDRNFKPGFRIDLHIKDLANALDT
SHGVGAQLPLTAAVEQALRADGHGNDDHSALACYYEKLAKVEVTR
BLAST against CATH

[top]
Domain COMBS Sequence 

>pdb|1vpdA02
GAGNVTKLANQVIVALNIAAXSEALTLATKAGVNPDLVYQAIRGGLAGSTVLDAKAPXVXDRNFKPGFRIDLHIKDLANA
LDTSHGVGAQLPLTAAVXEXXQALRADGHGNDDHSALACYYEKLAKVEVTR
BLAST against CATH

[top]
Domain History Events (3)

Insertion by sillitoe on 06 Mar 2006 15:40

HomCheck 'Assigned H' domains

Flow stage update by sillitoe on 06 Mar 2006 15:40

HomCheck 'Assigned H' domains

Insertion by auto on 06 Mar 2006 00:09

Cut based on decision in database "DomChop" on "cathdb"