CATH Domain: 1vlaA01 XML data for domain: 1vlaA01

Molscript image for 1vlaA01
1vlaA01
PDB coordinates for domain 1vlaA01

PDB 1vla, Chain A, Domain 1

CATH CodeLevel DescriptionLinks
2 Mainly Beta
2.20 Single Sheet
2.20.25 N-terminal domain of TfIIb
2.20.25.10 Gene3D
2.20.25.10.4
2.20.25.10.4.1
2.20.25.10.4.1.1
2.20.25.10.4.1.1.1
2.20.25.10.4.1.1.1.1

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Segment boundaries for domain 1vlaA01

Chopping figure for domain 1vlaA01
DomainStart PDB ResidueStop PDB Residue
1vlaA01 -5 36
1vlaA02 37 138

Structural Neighbourhood (3 entries)

There are 3 matching structural neighberhood comparisons for CATH ID 2.20.25.10.4.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 3 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1ml8A01 84.28 Putative redox proteinEscherichia coli O157:H7Protein yhfA 2.20.25.10 34 23 84 2.80 3.33
1lqlC01 78.48 Mycoplasma pneumoniaeUncharacterized protein MG427 homolog 2.20.25.10 42 13 78 3.26 4.15
1lqlA01 72.58 Mycoplasma pneumoniaeUncharacterized protein MG427 homolog 2.20.25.10 26 3 65 2.83 4.30
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Displaying entries 1 to 3 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1vlaA01
HHHHHHQARWIGNFHVRTDSNHDVLDTKEEVGGKDAAP
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1vlaA01
XGSDKIHHHHHHXQARWIGNXXFHVRTDSNHDVLXDTKEEVGGKDAAP
BLAST against CATH

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Domain History Events (3)

Insertion by sillitoe on 06 Mar 2006 15:40

HomCheck 'Assigned H' domains

Flow stage update by sillitoe on 06 Mar 2006 15:40

HomCheck 'Assigned H' domains

Insertion by auto on 06 Mar 2006 00:08

Cut based on decision in database "DomChop" on "cathdb"