CATH Domain: 1vhxB00 XML data for domain: 1vhxB00

Molscript image for 1vhxB00
1vhxB00
PDB coordinates for domain 1vhxB00

PDB 1vhx, Chain B, Domain 0

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.30 2-Layer Sandwich
3.30.420 Nucleotidyltransferase; domain 5
3.30.420.140 Ribonuclease H-like (UPF0081) Gene3D
3.30.420.140.2
3.30.420.140.2.1
3.30.420.140.2.1.1
3.30.420.140.2.1.1.1
3.30.420.140.2.1.1.1.1

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Segment boundaries for domain 1vhxB00

Chopping figure for domain 1vhxB00
DomainStart PDB ResidueStop PDB Residue
1vhxB00 0 137

Structural Neighbourhood (0 entries)

Sorry, we could not find any non-redundant representatives with similar structural scores to this domain in CATH.


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Domain ATOM Sequence 

>pdb|1vhxB00
SLRILGLDLGTKTLGVALSDEGWTAQGIETIKINEAEGDYGLSRLSELIKDYTIDKIVLGFPKNNGTVGPRGEASQTFAK
VLETTYNVPVVLWDERLTTAAEKLIAADVSRQKRKKVIDKAAVILQGYLDSL
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1vhxB00
XSLRILGLDLGTKTLGVALSDEXGWTAQGIETIKINEAEGDYGLSRLSELIKDYTIDKIVLGFPKNXNGTVGPRGEASQT
FAKVLETTYNVPVVLWDERLTTXAAEKXLIAADVSRQKRKKVIDKXAAVXILQGYLDSLNEGGSHHHHHH
BLAST against CATH

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Domain History Events (5)

Domain assigned by auto on 28 Apr 2006 18:44

Assigning to "3.30.420.140" based on similarity with "1vhxA00" (NWSI: 95.3333333333333, NWO: 100, SPS: 94.87, SPO: 98, RMSD: 1.01)

Flow stage update by auto on 28 Apr 2006 17:50

NW result present for Domain "1vhxB00"

Flow stage update by auto on 28 Apr 2006 17:44

All required files are present for Domain "1vhxB00"

Flow stage update by auto on 27 Apr 2006 17:31

Beginning processing for Domain "1vhxB00"

Insertion by auto on 09 Mar 2006 01:43

Final ChopClose added based on similarity with "1vhxA" [LEE: 0, LME: 0, MR: 2, LG: 2, SS: 94.87, SI: 95.3333333333333, SO: 100]