CATH Domain: 1vhwA00 XML data for domain: 1vhwA00

Molscript image for 1vhwA00
1vhwA00
PDB coordinates for domain 1vhwA00

PDB 1vhw, Chain A, Domain 0

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.40 3-Layer(aba) Sandwich
3.40.50 Rossmann fold
3.40.50.1580 Gene3D
3.40.50.1580.4
3.40.50.1580.4.1
3.40.50.1580.4.1.1
3.40.50.1580.4.1.1.1
3.40.50.1580.4.1.1.1.1

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Segment boundaries for domain 1vhwA00

Chopping figure for domain 1vhwA00
DomainStart PDB ResidueStop PDB Residue
1vhwA00 2 238

Structural Neighbourhood (7 entries)

There are 7 matching structural neighberhood comparisons for CATH ID 3.40.50.1580.4.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 7 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1je0C00 90.61 S-methyl-5'-thioadenosine phosphorylase5'-methylthioadenosine phosphorylase [EC:2.4.2.28]Cysteine and methionine metabolismSulfolobus solfataricusMetabolic pathways 3.40.50.1580 227 28 94 1.36 1.43
3emvA01 89.67 Pyrimidine metabolismUridine phosphorylase, putativePlasmodium vivaxUridine phosphorylase [EC:2.4.2.3]Metabolic pathways 3.40.50.1580 241 25 96 1.85 1.91
1zosA00 84.98 Cysteine and methionine metabolismMetabolic pathwaysS-adenosylhomocysteine/5'-methylthioadenosine nucleosidase [EC:3.2.2.9]5'-methylthioadenosine / S-adenosylhomocysteine nucleosidaseStreptococcus pneumoniae R6 3.40.50.1580 230 20 91 3.26 3.56
3bjeA01 83.24 [EC:2.4.2.-]Nucleoside phosphorylase, putativeTrypanosoma brucei 3.40.50.1580 309 22 72 1.99 2.73
2guwC02 82.82 Purine metabolismSalmonella enterica subsp. enterica serovar TyphimuriumAMP nucleosidaseAMP nucleosidase [EC:3.2.2.4] 3.40.50.1580 275 16 81 2.87 3.51
1g2oA00 80.09 Pyrimidine metabolismPurine metabolismNicotinate and nicotinamide metabolismMetabolic pathwaysPurine-nucleoside phosphorylase [EC:2.4.2.1] 3.40.50.1580 262 12 87 3.83 4.40
3fucA00 79.94 Purine-nucleoside phosphorylase activityBos taurusPurine nucleoside phosphorylase 3.40.50.1580 273 13 84 3.91 4.60
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Displaying entries 1 to 7 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1vhwA00
ATPHINAQMGDFADVVLMPGDPLRAKYIAENFLDNAVQVCDVRNMFGYTGTYKGRRISVMGHGMGIPSCSIYVTELIKDY
GVKKIIRVGSCGAVNEGIKVRDVVIGMGACTDSKVNRIRFKDHDFAAIADYKMVKAAEEAAKARGIDVKVGNLFSAELFY
TPDPSMFDVMDKYGIVGVEMEAAGIYGVAAEYGAKALAICTVSDHIKTGEQTTSEERQNTFNEMIEIALDSVLIGDQ
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1vhwA00
MSLATPHINAQMGDFADVVLMPGDPLRAKYIAENFLDNAVQVCDVRNMFGYTGTYKGRRISVMGHGMGIPSCSIYVTELI
KDYGVKKIIRVGSCGAVNEGIKVRDVVIGMGACTDSKVNRIRFKDHDFAAIADYKMVKAAEEAAKARGIDVKVGNLFSAE
LFYTPDPSMFDVMDKYGIVGVEMEAAGIYGVAAEYGAKALAICTVSDHIKTGEQTTSEERQNTFNEMIEIALDSVLIGDQ
AGYEGGSHHHHHH
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 19:20

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 19:20

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 15:42

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"