CATH Domain: 1vhsA00 XML data for domain: 1vhsA00

Molscript image for 1vhsA00
1vhsA00
PDB coordinates for domain 1vhsA00

PDB 1vhs, Chain A, Domain 0

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.40 3-Layer(aba) Sandwich
3.40.630 Aminopeptidase
3.40.630.30 Gene3D
3.40.630.30.14
3.40.630.30.14.1
3.40.630.30.14.1.1
3.40.630.30.14.1.1.2
3.40.630.30.14.1.1.2.1

Segment boundaries for domain 1vhsA00

Chopping figure for domain 1vhsA00
DomainStart PDB ResidueStop PDB Residue
1vhsA00 0 164

Structural Neighbourhood (47 entries)

There are 47 matching structural neighberhood comparisons for CATH ID 3.40.630.30.14.1.1.2.1 (SIMAX score < 5)

Displaying entries 1 to 47 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
2ge3B00 87.24 Agrobacterium tumefaciens str. C58Probable acetyltransferase 3.40.630.30 159 20 93 2.17 2.32
2i79D00 86.68 Acetyltransferase, GNAT familyStreptococcus pneumoniae 3.40.630.30 167 24 91 2.52 2.77
2ae6A00 86.68 Acetyltransferase, GNAT familyEnterococcus faecalis 3.40.630.30 144 22 90 2.68 2.95
3k9uA00 86.01 Putative uncharacterized protein Ta0374Thermoplasma acidophilum 3.40.630.30 159 16 86 2.04 2.37
2r7hB00 85.87 Desulfovibrio desulfuricans subsp. desulfuricans str. G20Putative uncharacterized protein 3.40.630.30 157 18 93 2.78 2.97
3g8wA00 85.69 Staphylococcus epidermidis ATCC 12228Lactococcal prophage ps3 protein 05 3.40.630.30 158 15 93 2.52 2.69
2fiwA00 85.52 Putative acetyltransferase [EC:2.3.1.-]GCN5-related N-acetyltransferase:Aminotransferase, class-IIRhodopseudomonas palustris 3.40.630.30 156 13 86 2.83 3.27
3eo4A00 85.50 Methanocaldococcus jannaschiiUncharacterized protein MJ1062 3.40.630.30 155 20 87 2.28 2.60
1tiqB00 85.41 Bacillus subtilisProtease synthase and sporulation negative regulatory protein PAI 1 3.40.630.30 161 17 88 2.46 2.79
3exnA00 85.29 Tyrosine metabolismLimonene and pinene degradation1- and 2-Methylnaphthalene degradationPhenylalanine metabolismBenzoate degradation via CoA ligation 3.40.630.30 151 20 89 2.54 2.83
2q7bA00 85.28 Acetyltransferase, GNAT familyStreptococcus agalactiae serogroup V 3.40.630.30 161 15 85 3.09 3.60
2fiaA00 84.62 Acetyltransferase, GNAT familyEnterococcus faecalis 3.40.630.30 157 16 91 2.82 3.10
3fbuA00 83.42 Bacillus anthracisAcetyltransferase, GNAT family 3.40.630.30 166 20 86 2.64 3.04
1q2yA00 83.29 Bacillus subtilisUncharacterized N-acetyltransferase yjcF 3.40.630.30 140 11 85 3.21 3.74
1s3zA00 83.20 Salmonella enterica subsp. enterica serovar EnteritidisAminoglycoside 6'-N-acetyltransferase 3.40.630.30 147 13 89 4.29 4.82
1qsmD00 82.98 CytoplasmIdentical protein bindingSaccharomyces cerevisiaeHistone acetyltransferase activityHistone acetyltransferase HPA2 3.40.630.30 152 18 88 3.16 3.58
1n71B00 82.92 Aac(6')-Ii proteinEnterococcus faecium 3.40.630.30 179 11 81 2.68 3.31
1cjwA00 82.54 Ovis ariesSerotonin N-acetyltransferase 3.40.630.30 166 14 86 2.93 3.38
1nslA00 82.43 Bacillus subtilisPutative ribosomal N-acetyltransferase ydaF 3.40.630.30 173 19 86 3.28 3.78
2i00C01 81.85 Acetyltransferase, GNAT familyEnterococcus faecalis 3.40.630.30 144 10 81 2.86 3.52
3d3sA00 81.79 L-2,4-diaminobutyric acid acetyltransferaseGlycine, serine and threonine metabolismBordetella parapertussisL-2,4-diaminobutyric acid acetyltransferase [EC:2.3.1.178]Metabolic pathways 3.40.630.30 157 16 92 3.00 3.25
3fb3A00 81.77 Amino sugar and nucleotide sugar metabolismGlucosamine-phosphate N-acetyltransferase [EC:2.3.1.4]N-acetyltransferase, putativeTrypanosoma brucei 3.40.630.30 141 17 87 3.58 4.11
1xebA00 81.71 Pseudomonas aeruginosaElaA proteinPutative uncharacterized protein 3.40.630.30 146 15 85 2.84 3.31
2dxqA00 81.61 Agrobacterium tumefaciens str. C58Acetyltransferase 3.40.630.30 145 18 83 2.84 3.39
1yreC00 81.61 Pseudomonas aeruginosaPutative uncharacterized protein 3.40.630.30 182 14 82 3.13 3.77
2pdoA01 81.55 Shigella flexneriAcetyltransferase ypeA 3.40.630.30 118 18 73 2.87 3.90
2qecA00 81.30 Corynebacterium glutamicumGCN5-related N-acetyltransferase 3.40.630.30 175 14 81 3.52 4.34
1sqhA02 81.13 Drosophila melanogasterCG14615 3.40.630.30 128 14 72 2.70 3.74
1y9kA01 80.95 Tyrosine metabolismLimonene and pinene degradationIAA acetyltransferaseBacillus cereus ATCC 145791- and 2-Methylnaphthalene degradation 3.40.630.30 110 20 70 3.11 4.42
2ozgA01 80.91 Anabaena variabilis ATCC 29413GCN5-related N-acetyltransferase 3.40.630.30 117 16 74 2.62 3.50
3efaA00 80.78 Tyrosine metabolismBenzoate degradation via CoA ligationLactobacillus plantarumAcetyltransferase (Putative)Limonene and pinene degradation 3.40.630.30 141 12 85 3.47 4.04
3f5bA00 80.66 Aminoglycoside N(6')acetyltransferaseLegionella pneumophila subsp. pneumophila str. Philadelphia 1 3.40.630.30 163 11 89 4.41 4.92
2r1iA01 80.24 Arthrobacter sp. FB24GCN5-related N-acetyltransferase 3.40.630.30 129 13 78 3.22 4.12
2fckA00 80.03 Vibrio choleraeRibosomal-protein-serine acetyltransferase, putative 3.40.630.30 171 13 84 4.19 4.98
1lrzA01 79.82 Peptidoglycan biosynthesisMetabolic pathwaysPeptidoglycan pentaglycine glycine transferase (the second and third glycine) [EC:2.3.2.-]Aminoacyltransferase femAStaphylococcus aureus 3.40.630.30 143 9 81 3.79 4.63
2fl4A02 79.81 Arginine and proline metabolismSpermine/spermidine acetyltransferase, putativeDiamine N-acetyltransferase [EC:2.3.1.57]Metabolic pathwaysEnterococcus faecalis 3.40.630.30 104 10 65 2.74 4.20
2qmlA00 79.67 BH2621 proteinBacillus halodurans 3.40.630.30 184 12 76 3.58 4.67
1y9wA01 79.53 AcetyltransferaseBacillus cereus ATCC 14579 3.40.630.30 104 23 65 2.40 3.65
2atrA00 79.18 Acetyltransferase, GNAT familyStreptococcus pneumoniae 3.40.630.30 127 18 77 3.59 4.64
1y7rA00 78.71 Staphylococcus aureus subsp. aureus Mu50Putative uncharacterized protein 3.40.630.30 125 16 74 3.34 4.46
1bo4A00 78.63 Aminoglycoside-(3)-N-acetyltransferaseSerratia marcescens 3.40.630.30 136 8 80 3.45 4.28
2g3aA02 77.80 Agrobacterium tumefaciens str. C58Acetyltransferase 3.40.630.30 97 20 61 2.67 4.31
2hv2A03 77.24 Enterococcus faecalisPutative uncharacterized protein 3.40.630.30 148 6 78 3.50 4.45
3dnsA00 76.91 Ribosomal-protein-alanine N-acetyltransferase [EC:2.3.1.128]Clostridium acetobutylicumRibosomal-protein-alanine acetyltransferase (Acetylating enzyme for N-terminal of ribosomal protein S5) 3.40.630.30 126 8 73 3.53 4.80
1ro5A01 75.25 Pseudomonas aeruginosaAcyl homoserine lactone synthase [EC:2.3.1.184]Acyl-homoserine-lactone synthase 3.40.630.30 187 12 75 3.63 4.81
1lrzA02 74.49 Peptidoglycan biosynthesisMetabolic pathwaysPeptidoglycan pentaglycine glycine transferase (the second and third glycine) [EC:2.3.2.-]Aminoacyltransferase femAStaphylococcus aureus 3.40.630.30 195 7 62 3.00 4.83
2ozgA02 74.01 Anabaena variabilis ATCC 29413GCN5-related N-acetyltransferase 3.40.630.30 163 7 78 3.81 4.85
Displaying entries 1 to 47 (page 1 of 1)


Domain ATOM Sequence

>pdb|1vhsA00
SLTLRLAEHRDLEAVVAIYNSTIASRVTADTEPVTPEDREWFSGHTESRPLYVAEDENGNVAAWISFETFYGRPAYNKTA
EVSIYIDEACRGKGVGSYLLQEALRIAPNLGIRSLAFIFGHNKPSLKLFEKHGFAEWGLFPGIAEDGKRYDLKILGRELS
E    

Domain COMBS Sequence

>pdb|1vhsA00
XSLTLRLAEHRDLEAVVAIYNSTIASRXVTADTEPVTPEDRXEWFSGHTESRPLYVAEDENGNVAAWISFETFYGRPAYN
KTAEVSIYIDEACRGKGVGSYLLQEALRIAPNLGIRSLXAFIFGHNKPSLKLFEKHGFAEWGLFPGIAEXDGKRYDLKIL
GRELSEGGSHHHHHH    

Domain History Events (3)

Insertion by sillitoe on 06 Mar 2006 15:40

HomCheck 'Assigned H' domains

Flow stage update by sillitoe on 06 Mar 2006 15:40

HomCheck 'Assigned H' domains

Insertion by auto on 06 Mar 2006 00:07

Cut based on decision in database "DomChop" on "cathdb"