CATH Domain: 1vhqA00 XML data for domain: 1vhqA00

Molscript image for 1vhqA00
1vhqA00
PDB coordinates for domain 1vhqA00

PDB 1vhq, Chain A, Domain 0

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.40 3-Layer(aba) Sandwich
3.40.50 Rossmann fold
3.40.50.880 Gene3D
3.40.50.880.5
3.40.50.880.5.1
3.40.50.880.5.1.1
3.40.50.880.5.1.1.1
3.40.50.880.5.1.1.1.1

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Segment boundaries for domain 1vhqA00

Chopping figure for domain 1vhqA00
DomainStart PDB ResidueStop PDB Residue
1vhqA00 5 220

Structural Neighbourhood (6 entries)

There are 6 matching structural neighberhood comparisons for CATH ID 3.40.50.880.5.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 6 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
2vrnA00 82.54 Protease I [EC:3.2.-.-]Deinococcus radioduransProtease I 3.40.50.880 184 17 74 2.12 2.84
1oi4A00 81.80 Protease I [EC:3.2.-.-]Response to pHResponse to heatProtein yhbOEscherichia coli K-12 3.40.50.880 191 17 74 2.73 3.66
1qvzA00 80.60 Probable chaperone protein HSP31Soluble fractionSaccharomyces cerevisiaeProtein binding 3.40.50.880 231 13 70 2.60 3.66
1iphC03 79.99 Metabolic pathwaysMethane metabolismTryptophan metabolismCatalase [EC:1.11.1.6]Catalase activity 3.40.50.880 154 14 62 2.23 3.56
2fexA00 77.41 Agrobacterium tumefaciens str. C58Putative uncharacterized protein 3.40.50.880 172 15 71 3.24 4.54
1n57A00 76.21 Molecular chaperone HchA (Hsp31)Escherichia coli K-12Chaperone protein hchACytosol 3.40.50.880 272 15 61 3.05 4.94
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Displaying entries 1 to 6 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1vhqA00
KKIGVILSGCGVYDGSEIHEAVLTLLAISRSGAQAVCFAPDKQQVDVINHLTGEATETRNVLIEAARITRGEIRPLAQAD
AAELDALIVPGGFGAAKNLSNFASLGSECTVDRELKALAQAHQAGKPLGFIAPALPKIFDFPLRLTIGTDIDTAEVLEEG
AEHVPCPVDDIVVDEDNKIVTTPAYLAQNIAEAASGIDKLVSRVLVLAE
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1vhqA00
XSLITXKKIGVILSGCGVYDGSEIHEAVLTLLAISRSGAQAVCFAPDKQQVDVINHLTGEAXTETRNVLIEAARITRGEI
RPLAQADAAELDALIVPGGFGAAKNLSNFASLGSECTVDRELKALAQAXHQAGKPLGFXXIAPAXLPKIFDFPLRLTIGT
DIDTAEVLEEXGAEHVPCPVDDIVVDEDNKIVTTPAYXLAQNIAEAASGIDKLVSRVLVLAEEGGSHHHHHH
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 19:18

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 19:18

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 15:41

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"