CATH Domain: 1vh5A00 XML data for domain: 1vh5A00

Molscript image for 1vh5A00
1vh5A00
PDB coordinates for domain 1vh5A00

PDB 1vh5, Chain A, Domain 0

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.10 Roll
3.10.129 Thiol Ester Dehydrase; Chain A
3.10.129.10 Gene3D
3.10.129.10.1
3.10.129.10.1.1
3.10.129.10.1.1.1
3.10.129.10.1.1.1.1
3.10.129.10.1.1.1.1.1

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Segment boundaries for domain 1vh5A00

Chopping figure for domain 1vh5A00
DomainStart PDB ResidueStop PDB Residue
1vh5A00 0 137

Structural Neighbourhood (34 entries)

There are 34 matching structural neighberhood comparisons for CATH ID 3.10.129.10.1.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 34 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1q4uB00 90.25 Arthrobacter sp. SUFcbC1 3.10.129.10 139 24 97 4.20 4.29
1zkiA00 88.50 Pseudomonas aeruginosaPhenylacetic acid degradation proteinPutative uncharacterized protein 3.10.129.10 118 26 85 1.96 2.29
1wluA00 88.35 Thermus thermophilus HB8Phenylacetic acid degradation protein PaaIPhenylacetic acid degradation protein 3.10.129.10 117 19 84 1.72 2.05
2fs2B00 87.99 Acyl-coenzyme A thioesterase paaIPhenylacetic acid degradation proteinEscherichia coli K-12 3.10.129.10 134 16 92 2.23 2.40
1yocA00 87.60 Pseudomonas aeruginosaPutative uncharacterized protein 3.10.129.10 145 12 92 2.54 2.75
2pimA00 87.22 Ralstonia eutropha JMP134Phenylacetic acid degradation-related protein 3.10.129.10 127 17 90 2.34 2.58
2qwzA01 87.16 Phenylacetic acid degradation-related proteinRuegeria sp. TM1040 3.10.129.10 128 17 91 2.39 2.62
1t82A00 87.14 Shewanella oneidensisPutative uncharacterized protein 3.10.129.10 138 10 90 2.07 2.29
1sh8B00 85.71 Pseudomonas aeruginosaPutative uncharacterized protein 3.10.129.10 149 16 89 2.68 3.00
1ixlA00 85.26 Putative uncharacterized protein PH1136Pyrococcus horikoshii 3.10.129.10 127 12 87 2.94 3.35
2ov9A01 84.82 Rhodococcus jostii RHA1Putative uncharacterized protein 3.10.129.10 142 14 90 2.86 3.15
1s5uE00 84.65 Protein bindingEscherichia coli K-12Acyl-CoA thioester hydrolase ybgC 3.10.129.10 136 8 78 3.86 4.89
1c8uA02 84.64 Biosynthesis of unsaturated fatty acidsAcyl-CoA thioesterase II [EC:3.1.2.-]Acyl-CoA thioesterase 2Acyl-CoA thioesterase activityFatty acid catabolic process 3.10.129.10 115 9 79 3.60 4.52
3bjkD00 84.61 Acyl-CoA thioesterase YciA [EC:3.1.2.-]Haemophilus influenzaeBiosynthesis of unsaturated fatty acidsUncharacterized acyl-CoA thioester hydrolase HI_0827 3.10.129.10 139 9 74 2.01 2.71
1z6bC00 84.50 Fatty acid biosynthesisMetabolic pathways3R-hydroxymyristoyl ACP dehydrase [EC:4.2.1.-]Plasmodium falciparumBeta-hydroxyacyl-ACP dehydratase 3.10.129.10 138 7 91 3.31 3.63
2prxA00 84.18 Shewanella loihica PV-4Thioesterase superfamily protein 3.10.129.10 108 12 78 2.46 3.14
3b7kA02 84.01 Acetyl-CoA hydrolase [EC:3.1.2.1]Pyruvate metabolismHomo sapiensAcyl-coenzyme A thioesterase 12 3.10.129.10 121 8 76 3.18 4.18
1tbuB00 83.86 Palmitoyl-CoA hydrolase [EC:3.1.2.2]Protein bindingBiosynthesis of unsaturated fatty acidsPeroxisomal acyl-coenzyme A thioester hydrolase 1Peroxisome 3.10.129.10 98 10 70 1.92 2.73
1njkA00 83.86 Long-chain acyl-CoA thioesterase tesCAcyl-CoA thioesterase activityThioesterase III [EC:3.1.2.-]Fatty acid beta-oxidationEscherichia coli K-12 3.10.129.10 130 10 73 2.72 3.68
3b7kC02 83.77 Acetyl-CoA hydrolase [EC:3.1.2.1]Pyruvate metabolismHomo sapiensAcyl-coenzyme A thioesterase 12 3.10.129.10 110 9 72 1.62 2.24
2q2bA00 83.69 Mus musculusCytosolic acyl coenzyme A thioester hydrolaseFatty acid catabolic processPalmitoyl-CoA hydrolase activity 3.10.129.10 141 8 71 1.75 2.44
2oiwA00 83.66 Geobacillus kaustophilusHypothetical conserved protein 3.10.129.10 129 9 73 2.34 3.20
3ck1A00 83.63 Ubiquinone and other terpenoid-quinone biosynthesisRalstonia eutropha JMP1344-hydroxybenzoyl-CoA thioesterase [EC:3.1.2.23]2,4-Dichlorobenzoate degradationMetabolic pathways 3.10.129.10 138 8 75 2.77 3.68
2q78F00 83.54 Thermotoga maritimaPutative uncharacterized protein 3.10.129.10 131 9 77 2.57 3.31
2nujA01 83.37 Jannaschia sp. CCS1Thioesterase superfamily 3.10.129.10 145 5 73 2.68 3.63
2essA01 82.80 Bacteroides thetaiotaomicronAcyl-ACP thioesterase 3.10.129.10 138 5 76 3.16 4.11
1lo7A00 82.80 4-hydroxybenzoyl-CoA thioesterasePseudomonas sp. CBS3 3.10.129.10 140 6 75 2.67 3.56
2aliA00 82.78 Pseudomonas aeruginosaPutative uncharacterized protein 3.10.129.10 126 9 73 2.75 3.76
1vpmB00 82.77 Acyl-CoA hydrolaseBacillus halodurans 3.10.129.10 148 12 70 1.78 2.53
2hljA01 81.99 Pseudomonas putida KT2440Putative uncharacterized protein 3.10.129.10 132 7 75 2.74 3.64
1c8uA01 80.97 Biosynthesis of unsaturated fatty acidsAcyl-CoA thioesterase II [EC:3.1.2.-]Acyl-CoA thioesterase 2Acyl-CoA thioesterase activityFatty acid catabolic process 3.10.129.10 156 7 82 4.01 4.85
2hx5A00 80.67 Ubiquinone and other terpenoid-quinone biosynthesis1,4-dihydroxy-2-naphthoyl-CoA hydrolase1,4-dihydroxy-2-naphthoyl-CoA thioesterase [EC:3.1.2.-]Prochlorococcus marinus str. MIT 9313Metabolic pathways 3.10.129.10 141 7 74 3.31 4.44
1s9cL01 79.72 Sterol bindingPeroxisomeEstradiol 17-beta-dehydrogenase activityPrimary bile acid biosynthesisSterol transporter activity 3.10.129.10 140 6 69 3.07 4.43
1mkaA00 78.04 Fatty acid biosynthesisMetabolic pathways3-hydroxydecanoyl-[acyl-carrier-protein] dehydrataseFatty acid biosynthetic process3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.60] 3.10.129.10 171 11 77 3.48 4.51
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Displaying entries 1 to 34 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1vh5A00
SLIWKRKITLEALNAMGEGNMVGFLDIRFEHIGDDTLEATMPVDSRTKQPFGLLHGGASVVLAESIGSVAGYLCTEGEQK
VVGLEINANHVRSAREGRVRGVCKPLHLGSRHQVWQIEIFDEKGRLCCSSRLTTAILE
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1vh5A00
MSLIWKRKITLEALNAMGEGNMVGFLDIRFEHIGDDTLEATMPVDSRTKQPFGLLHGGASVVLAESIGSVAGYLCTEGEQ
KVVGLEINANHVRSAREGRVRGVCKPLHLGSRHQVWQIEIFDEKGRLCCSSRLTTAILEGGSHHHHHH
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 18:51

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 18:51

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 15:14

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"