CATH Domain: 1vfyA00 XML data for domain: 1vfyA00

Molscript image for 1vfyA00
1vfyA00
PDB coordinates for domain 1vfyA00

PDB 1vfy, Chain A, Domain 0

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.30 2-Layer Sandwich
3.30.40 Herpes Virus-1
3.30.40.10 Zinc/RING finger domain, C3HC4 (zinc finger) Gene3D
3.30.40.10.1
3.30.40.10.1.1
3.30.40.10.1.1.1
3.30.40.10.1.1.1.1
3.30.40.10.1.1.1.1.1

[top]
Segment boundaries for domain 1vfyA00

Chopping figure for domain 1vfyA00
DomainStart PDB ResidueStop PDB Residue
1vfyA00 169 235

Structural Neighbourhood (1 entries)

There are 1 matching structural neighberhood comparisons for CATH ID 3.30.40.10.1.1.1.1.1 (SIMAX score < 5)

[1]
Displaying entries 1 to 1 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
2gviA03 76.23 Putative uncharacterized protein Ta1109Thermoplasma acidophilum 3.30.60.20 32 18 47 1.51 3.16
[1]
Displaying entries 1 to 1 (page 1 of 1)


[top]
Domain ATOM Sequence 

>pdb|1vfyA00
DWIDSDACMICSKKFSLLNRKHHCRSCGGVFCQEHSSNSIPLPDLGIYEPVRVCDSCFEDYEFIVTD
BLAST against CATH

[top]
Domain COMBS Sequence 

>pdb|1vfyA00
DSKTPADWIDSDACMICSKKFSLLNRKHHCRSCGGVFCQEHSSNSIPLPDLGIYEPVRVCDSCFEDYEFIVTD
BLAST against CATH

[top]
Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 18:58

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 18:58

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 15:25

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"