CATH Domain: 1vdwA02 XML data for domain: 1vdwA02

Molscript image for 1vdwA02
1vdwA02
PDB coordinates for domain 1vdwA02

PDB 1vdw, Chain A, Domain 2

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.40 3-Layer(aba) Sandwich
3.40.190 D-Maltodextrin-Binding Protein; domain 2
3.40.190.80 Gene3D
3.40.190.80.4
3.40.190.80.4.1
3.40.190.80.4.1.1
3.40.190.80.4.1.1.1
3.40.190.80.4.1.1.1.1

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Segment boundaries for domain 1vdwA02

Chopping figure for domain 1vdwA02
DomainStart PDB ResidueStop PDB Residue
1vdwA01 2 140
1vdwA02 141 254

Structural Neighbourhood (3 entries)

There are 3 matching structural neighberhood comparisons for CATH ID 3.40.190.80.4.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 3 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1lbvA02 90.58 Inositol-1-monophosphataseArchaeoglobus fulgidusStreptomycin biosynthesisMyo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]Metabolic pathways 3.40.190.80 114 36 94 2.02 2.13
1jp4A02 84.32 Rattus norvegicusInositol or phosphatidylinositol phosphatase activitySulfur metabolism3'(2'),5'-bisphosphate nucleotidase 13'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] 3.40.190.80 129 15 85 2.55 2.99
3b8bA02 81.29 CysQ proteinCysQ, sulfite synthesis pathway proteinBacteroides thetaiotaomicron 3.40.190.80 100 15 83 3.23 3.88
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Displaying entries 1 to 3 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1vdwA02
KVRELAEKPSISFYTKGKGTKIIDKVKRTRTLGAIALELAYLARGALDAVVDIRNYLRPTDIAAGVVIAREAGAIVKDLD
GKDVEITFSATEKVNIIAANNEELLETILRSIEK
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1vdwA02
KVRELAEKPSISFYTKGKGTKIIDKVKRTRTLGAIALELAYLARGALDAVVDIRNYLRPTDIAAGVVIAREAGAIVKDLD
GKDVEITFSATEKVNIIAANNEELLETILRSIEK
BLAST against CATH

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Domain History Events (3)

Insertion by sillitoe on 06 Mar 2006 15:40

HomCheck 'Assigned H' domains

Flow stage update by sillitoe on 06 Mar 2006 15:40

HomCheck 'Assigned H' domains

Insertion by auto on 06 Mar 2006 00:06

Cut based on decision in database "DomChop" on "cathdb"