CATH Domain: 1v9sD00 XML data for domain: 1v9sD00

Molscript image for 1v9sD00
1v9sD00
PDB coordinates for domain 1v9sD00

PDB 1v9s, Chain D, Domain 0

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.40 3-Layer(aba) Sandwich
3.40.50 Rossmann fold
3.40.50.2020 Gene3D
3.40.50.2020.8
3.40.50.2020.8.1
3.40.50.2020.8.1.1
3.40.50.2020.8.1.1.1
3.40.50.2020.8.1.1.1.1

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Segment boundaries for domain 1v9sD00

Chopping figure for domain 1v9sD00
DomainStart PDB ResidueStop PDB Residue
1v9sD00 2 208

Structural Neighbourhood (4 entries)

There are 4 matching structural neighberhood comparisons for CATH ID 3.40.50.2020.8.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 4 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
2e55A00 89.51 Pyrimidine metabolismUracil phosphoribosyltransferaseUracil phosphoribosyltransferase [EC:2.4.2.9]Metabolic pathwaysAquifex aeolicus 3.40.50.2020 208 43 90 1.50 1.65
1xttB00 88.68 Pyrimidine metabolismUracil phosphoribosyltransferase [EC:2.4.2.9]Sulfolobus solfataricusProbable uracil phosphoribosyltransferaseMetabolic pathways 3.40.50.2020 208 34 90 1.81 2.00
1bd3A00 87.87 Pyrimidine metabolismUracil phosphoribosyltransferaseUracil phosphoribosyltransferase [EC:2.4.2.9]Metabolic pathwaysToxoplasma gondii 3.40.50.2020 224 37 84 2.24 2.64
2p1zB00 77.66 Orotate phosphoribosyltransferase [EC:2.4.2.10]Pyrimidine metabolismPhosphoribosyltransferaseCorynebacterium diphtheriaeMetabolic pathways 3.40.50.2020 165 13 71 3.37 4.74
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Displaying entries 1 to 4 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1v9sD00
RITLVDHPLVQHKLAHLRDKRTGPKDFRELAEEVALAYEARDLELEETTVETPIAPARVKVLSGKKLALVAILRAGLVVE
GILKLVPHARVGHIGLYYIKLPPDIAERRAFLLDPLATGGSASLALSLLKERGATGVKLAILAAPEGLERIAKDHPDTEV
VVAAIDERLNDHGYIVPGLGDAGDRIYGTK
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1v9sD00
XRITLVDHPLVQHKLAHLRDKRTGPKDFRELAEEVAXLXAYEAXRDLELEETTVETPIAPARVKVLSGKKLALVAILRAG
LVXVEGILKLVPHARVGHIGLYRDPESLNPVQYYIKLPPDIAERRAFLLDPXLATGGSASLALSLLKERGATGVKLXAIL
AAPEGLERIAKDHPDTEVVVAAIDERLNDHGYIVPGLGDAGDRIYGTK
BLAST against CATH

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Domain History Events (8)

Domain assigned by auto on 30 Nov 2006 05:29

Assigning to "3.40.50.2020" based on similarity with "1v9sB00"

Flow stage update by auto on 30 Nov 2006 05:28

No in_process hits for Domain "1v9sD00" ready to be processed

Update comment by auto on 30 Nov 2006 01:33

Domain "1v9sD00" hits Domain "1v9sC00" (96.6346153846154% over 100%) which is currently in process

Flow stage update by auto on 30 Nov 2006 01:31

Domain "1v9sD00" hits Domain "1v9sC00" (96.6346153846154% over 100%) which is currently in process

Flow stage update by auto on 30 Nov 2006 01:31

NW result present for Domain "1v9sD00"

Flow stage update by auto on 29 Nov 2006 13:24

All required files are present for Domain "1v9sD00"

Flow stage update by auto on 28 Nov 2006 18:21

Beginning processing for Domain "1v9sD00"

Insertion by auto on 28 Nov 2006 17:30

Final ChopClose added based on similarity with "1v9sB"