CATH Domain: 1v8wA00 XML data for domain: 1v8wA00

Molscript image for 1v8wA00
1v8wA00
PDB coordinates for domain 1v8wA00

PDB 1v8w, Chain A, Domain 0

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.90 Alpha-Beta Complex
3.90.79 Nucleoside Triphosphate Pyrophosphohydrolase
3.90.79.10 Nucleoside Triphosphate Pyrophosphohydrolase Gene3D
3.90.79.10.6
3.90.79.10.6.1
3.90.79.10.6.1.1
3.90.79.10.6.1.1.1
3.90.79.10.6.1.1.1.1

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Segment boundaries for domain 1v8wA00

Chopping figure for domain 1v8wA00
DomainStart PDB ResidueStop PDB Residue
1v8wA00 11 168

Structural Neighbourhood (10 entries)

There are 10 matching structural neighberhood comparisons for CATH ID 3.90.79.10.6.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 10 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1viuC00 85.83 GDP-mannose pyrophosphatase NudK [EC:3.6.1.-]Escherichia coli K-12GDP-mannose pyrophosphatase nudK 3.90.79.10 172 22 84 2.02 2.40
1g0sA00 83.27 Purine metabolismADP-ribose pyrophosphataseADP-ribose pyrophosphatase [EC:3.6.1.13]Protein bindingEscherichia coli K-12 3.90.79.10 201 27 75 2.42 3.20
2b0vA00 82.43 NUDIX hydrolaseNitrosomonas europaea 3.90.79.10 140 20 81 3.02 3.72
1k2eA00 81.54 Pyrobaculum aerophilumMutT/nudix family protein 3.90.79.10 152 15 74 2.77 3.74
3a6sA00 80.89 8-oxo-7,8-dihydroguanosine triphosphate pyrophosphatase activity7,8-dihydro-8-oxoguanine triphosphatase [EC:3.6.1.-]Magnesium ion bindingMutator mutT proteinManganese ion binding 3.90.79.10 125 17 79 3.01 3.80
2fmlA02 80.71 MutT/nudix family proteinEnterococcus faecalis 3.90.79.10 163 13 80 3.55 4.38
3cngC02 80.18 NUDIX hydrolaseNitrosomonas europaea 3.90.79.10 139 15 77 2.72 3.49
1ktgA00 80.11 Caenorhabditis elegansInduction of apoptosisBis(5'-nucleosyl)-tetraphosphatase [asymmetrical][EC:3.6.1.-]Bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) activity 3.90.79.10 137 17 79 3.43 4.29
3fspA03 77.85 Geobacillus stearothermophilusA/G-specific adenine glycosylase 3.90.79.10 126 15 80 3.36 4.17
1q33A02 77.42 ADP-ribose pyrophosphatase, mitochondrialPurine metabolismADP-ribose pyrophosphatase [EC:3.6.1.13]Homo sapiens 3.90.79.10 167 13 65 2.95 4.48
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Displaying entries 1 to 10 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1v8wA00
RTYLYRGRILNLALEGRYEIVEHKPAVAVIALREGRMLFVRQMRPAVGLAPLEIPAGLIEPGEDPLEAARRQLAEETGLS
GDLTYLFSYFVSPGFTDEKTHVFLAENLKEVEAHPAIEVVWMRPEEALERHQRGEVEFSATGLVGVLYYHAFLR
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1v8wA00
MGRVYYGGVERTYLYRGRILNLALEGRYEIVEHKPAVAVIALREGRMLFVRQMRPAVGLAPLEIPAGLIEPGEDPLEAAR
RQLAEETGLSGDLTYLFSYFVSPGFTDEKTHVFLAENLKEVEAHPDEDEAIEVVWMRPEEALERHQRGEVEFSATGLVGV
LYYHAFLRGR
BLAST against CATH

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Domain History Events (5)

Domain assigned by auto on 28 Apr 2006 18:50

Assigning to "3.90.79.10" based on similarity with "1v8rA00" (NWSI: 99.4117647058823, NWO: 100, SPS: 98.58, SPO: 98, RMSD: 0.20)

Flow stage update by auto on 28 Apr 2006 17:50

NW result present for Domain "1v8wA00"

Flow stage update by auto on 28 Apr 2006 17:44

All required files are present for Domain "1v8wA00"

Flow stage update by auto on 27 Apr 2006 17:31

Beginning processing for Domain "1v8wA00"

Insertion by auto on 09 Mar 2006 02:51

Final ChopClose added based on similarity with "1v8uA" [LEE: 0, LME: 0, MR: 1, LG: 1, SS: 98.70, SI: 100, SO: 100]