CATH Domain: 1v7cA02 XML data for domain: 1v7cA02

Molscript image for 1v7cA02
1v7cA02
PDB coordinates for domain 1v7cA02

PDB 1v7c, Chain A, Domain 2

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.40 3-Layer(aba) Sandwich
3.40.50 Rossmann fold
3.40.50.1100 Gene3D
3.40.50.1100.10
3.40.50.1100.10.1
3.40.50.1100.10.1.1
3.40.50.1100.10.1.1.1
3.40.50.1100.10.1.1.1.1

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Segment boundaries for domain 1v7cA02

Chopping figure for domain 1v7cA02
DomainStart PDB ResidueStop PDB Residue
1v7cA01 1 59
1v7cA01 157 351
1v7cA02 60 156

Structural Neighbourhood (7 entries)

There are 7 matching structural neighberhood comparisons for CATH ID 3.40.50.1100.10.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 7 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1p5jA02 91.09 Protein homodimerization activityL-serine ammonia-lyase activityGlycine, serine and threonine metabolismPyruvate biosynthetic processMetabolic pathways 3.40.50.1100 96 22 97 1.51 1.54
1j0aA02 87.82 1-aminocyclopropane-1-carboxylate deaminase [EC:3.5.99.7]Pyrococcus horikoshiiPropanoate metabolismPutative 1-aminocyclopropane-1-carboxylate deaminase 3.40.50.1100 104 17 92 2.15 2.33
1mioB04 79.78 Nitrogenase molybdenum-iron protein beta chainClostridium pasteurianum 3.40.50.1980 98 7 73 3.03 4.12
1e0tA01 78.06 Purine metabolismPyruvate metabolismMetabolic pathwaysGlycolysis / GluconeogenesisMembrane 3.40.1380.20 123 14 72 3.03 4.19
2q5cA02 76.95 Clostridium acetobutylicumNtrC family transcriptional regulator (PAS and AAA domains) 3.40.50.10660 89 10 73 2.96 4.04
1bykA02 76.02 Specific transcriptional repressor activityLacI family transcriptional regulator, trehalose operon repressorSequence-specific DNA binding transcription factor activityTranscriptionHTH-type transcriptional regulator treR 3.40.50.2300 117 6 58 2.81 4.83
1jflA02 75.84 Aspartate racemase [EC:5.1.1.13]228aa long hypothetical aspartate racemasePyrococcus horikoshiiAlanine, aspartate and glutamate metabolism 3.40.50.1860 109 8 65 3.20 4.91
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Displaying entries 1 to 7 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1v7cA02
FKDRGMTLAVSKAVEGGAQAVACASTGNTAASAAAYAARAGILAIVVLPAGYVALGKVAQSLVHGARIVQVEGNFDDALR
LTQKLTEAFPVALVNSV
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1v7cA02
FKDRGMTLAVSKAVEGGAQAVACASTGNTAASAAAYAARAGILAIVVLPAGYVALGKVAQSLVHGARIVQVEGNFDDALR
LTQKLTEAFPVALVNSV
BLAST against CATH

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Domain History Events (3)

Insertion by sillitoe on 06 Mar 2006 15:40

HomCheck 'Assigned H' domains

Flow stage update by sillitoe on 06 Mar 2006 15:40

HomCheck 'Assigned H' domains

Insertion by auto on 06 Mar 2006 00:05

Cut based on decision in database "DomChop" on "cathdb"