CATH Domain: 1v71A02 XML data for domain: 1v71A02

Molscript image for 1v71A02
1v71A02
PDB coordinates for domain 1v71A02

PDB 1v71, Chain A, Domain 2

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.40 3-Layer(aba) Sandwich
3.40.50 Rossmann fold
3.40.50.1100 Gene3D
3.40.50.1100.7
3.40.50.1100.7.1
3.40.50.1100.7.1.1
3.40.50.1100.7.1.1.1
3.40.50.1100.7.1.1.1.1

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Segment boundaries for domain 1v71A02

Chopping figure for domain 1v71A02
DomainStart PDB ResidueStop PDB Residue
1v71A01 6 55
1v71A01 153 323
1v71A02 56 152

Structural Neighbourhood (7 entries)

There are 7 matching structural neighberhood comparisons for CATH ID 3.40.50.1100.7.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 7 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1p5jA02 91.02 Protein homodimerization activityL-serine ammonia-lyase activityGlycine, serine and threonine metabolismPyruvate biosynthetic processMetabolic pathways 3.40.50.1100 96 26 97 1.86 1.90
1v7cA02 88.12 Threonine synthase [EC:4.2.3.1]Vitamin B6 metabolismGlycine, serine and threonine metabolismThreonine synthaseMetabolic pathways 3.40.50.1100 97 25 98 2.34 2.36
1j0aA02 84.89 1-aminocyclopropane-1-carboxylate deaminase [EC:3.5.99.7]Pyrococcus horikoshiiPropanoate metabolismPutative 1-aminocyclopropane-1-carboxylate deaminase 3.40.50.1100 104 26 91 2.67 2.92
1f2dA02 83.37 Williopsis saturnus1-aminocyclopropane-1-carboxylate deaminase 3.40.50.1100 102 12 78 2.97 3.79
1m1nB03 78.41 Nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1]Nitrogen metabolismAzotobacter vinelandiiNitrogenase molybdenum-iron protein beta chainMetabolic pathways 3.40.50.1980 106 8 66 3.08 4.66
1g7sA03 73.60 Methanothermobacter thermautotrophicus str. Delta HTranslation initiation factor IF-2 unclassified subunitProbable translation initiation factor IF-2 3.40.50.10050 81 8 51 2.47 4.79
1dljA02 73.12 Amino sugar and nucleotide sugar metabolismStarch and sucrose metabolismPentose and glucuronate interconversionsAscorbate and aldarate metabolismMetabolic pathways 3.40.50.1870 108 8 69 3.44 4.95
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Displaying entries 1 to 7 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1v71A02
FKFRGALNALSQLNEAQRKAGVLTFSSGNHAQAIALSAKILGIPAKIIMPLDAPEAKVAATKGYGGQVIMYDRYKDDREK
MAKEISEREGLTIIPPY
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1v71A02
FKFRGALNALSQLNEAQRKAGVLTFSSGNHAQAIALSAKILGIPAKIIMPLDAPEAKVAATKGYGGQVIMYDRYKDDREK
MAKEISEREGLTIIPPY
BLAST against CATH

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Domain History Events (6)

Domain assigned by auto on 23 Nov 2007 14:22

Assigning to "3.40.50.1100" based on similarity with "1tdjA02"

Flow stage update by auto on 23 Nov 2007 14:04

No in_process hits for Domain "1v71A02" ready to be processed

Flow stage update by auto on 23 Nov 2007 14:02

NW result present for Domain "1v71A02"

Flow stage update by auto on 23 Nov 2007 14:01

All required files are present for Domain "1v71A02"

Flow stage update by auto on 13 Nov 2007 00:11

Beginning processing for Domain "1v71A02"

Insertion by cuff on 24 Sep 2007 15:43

nice chopping