CATH Domain: 1v6sA02 XML data for domain: 1v6sA02

Molscript image for 1v6sA02
1v6sA02
PDB coordinates for domain 1v6sA02

PDB 1v6s, Chain A, Domain 2

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.40 3-Layer(aba) Sandwich
3.40.50 Rossmann fold
3.40.50.1270 Gene3D
3.40.50.1270.1
3.40.50.1270.1.2
3.40.50.1270.1.2.1
3.40.50.1270.1.2.1.1
3.40.50.1270.1.2.1.1.1

[top]
Segment boundaries for domain 1v6sA02

Chopping figure for domain 1v6sA02
DomainStart PDB ResidueStop PDB Residue
1v6sA01 1 177
1v6sA02 178 390

Structural Neighbourhood (1 entries)

There are 1 matching structural neighberhood comparisons for CATH ID 3.40.50.1270.1.2.1.1.1 (SIMAX score < 5)

[1]
Displaying entries 1 to 1 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1zmrA02 88.60 Glycolysis / GluconeogenesisMetabolic pathwaysPhosphoglycerate kinasePhosphoglycerate kinase [EC:2.7.2.3]Escherichia coli O6 3.40.50.1270 209 34 95 1.70 1.79
[1]
Displaying entries 1 to 1 (page 1 of 1)


[top]
Domain ATOM Sequence 

>pdb|1v6sA02
LLKDPERPYAVVLGGAKVSDKIGVIESLLPRIDRLLIGGAMAFTFLKALGGEVGRSLVEEDRLDLAKDLLGRAEALGVRV
YLPEDVVAAERIEAGVETRVFPARAIPVPYMGLDIGPKTREAFARALEGARTVFWNGPMGVFEVPPFDEGTLAVGQAIAA
LEGAFTVVGGGDSVAAVNRLGLKERFGHVSTGGGASLEFLEKGTLPGLEVLEG
BLAST against CATH

[top]
Domain COMBS Sequence 

>pdb|1v6sA02
LLKDPERPYAVVLGGAKVSDKIGVIESLLPRIDRLLIGGAMAFTFLKALGGEVGRSLVEEDRLDLAKDLLGRAEALGVRV
YLPEDVVAAERIEAGVETRVFPARAIPVPYMGLDIGPKTREAFARALEGARTVFWNGPMGVFEVPPFDEGTLAVGQAIAA
LEGAFTVVGGGDSVAAVNRLGLKERFGHVSTGGGASLEFLEKGTLPGLEVLEG
BLAST against CATH

[top]
Domain History Events (5)

Domain assigned by auto on 28 Apr 2006 18:45

Assigning to "3.40.50.1270" based on similarity with "1v6sB02" (NWSI: 100, NWO: 100, SPS: 97.34, SPO: 100, RMSD: 0.63)

Flow stage update by auto on 28 Apr 2006 17:50

NW result present for Domain "1v6sA02"

Flow stage update by auto on 28 Apr 2006 17:44

All required files are present for Domain "1v6sA02"

Flow stage update by auto on 27 Apr 2006 17:31

Beginning processing for Domain "1v6sA02"

Insertion by auto on 06 Mar 2006 00:04

Cut based on decision in database "DomChop" on "cathdb"